Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu9g01784 | ATGAAGTGCTTTCACTATTTCAGAGATAAATCTAGAAACGGTAGGCAAAGGTCAGCACCTGAACTGAAGGAGAAAGAGAAACTGGACTTTTCAGGGGCTGAGAGGGTCACCAAGTCTTCAAGCTCATCTGCTTCACCCCGCGGTATACCGGAACTGTATGAGGAGAAGGGTCAGAATTTGAGGGTCTTCTCCCTCTCAGAGCTCAAGCGTGCAACAAGTGATTTCAACAGGCTTTTTAAGATAGGAGAAGGTGGATTTGGAAGTGTGTTTAAAGGTTCAATCCAGCCTGCTGATGGGAATGGGAATCCTGTTGTAGTTGCTATCAAAAGGCTTAACAAGGATGCATTACAGGTGATGGGGACGTATGGTTATGCTGCTCCAGATTACATTGAGACAGGTCATCTCACAGCAAAGAGTGATGTGTGGAGTTTTGGAGTGGTTTTATATGAAATGCTTACTGGCAGGCGTTCAATGGAAAGAAACAGGCCTAAATCAGAGAAGAAACTGCTGGAGTGGGTGAAGCAATACCCTCCTGACAGCAAGAAGTTTGACACAATCATTGATCAGAGACTTCAAGGAGAGTATTCCAAGAATGGAGCAAGAAAACTCGCAAAACTCGCCGATCATTGCCTGCGTAAGAGTGCGAAAGATCGGCTGACGATGAGTCAGGTGGTGGAGAGACTGAAGCAGATAATGGAAGACACTTCTGAAGCAGATGACAGAAGTGTTGAGGTATCAGAAAATGGTCAAGCTGAGGCTGAAGAGAAGGGAAATCAATTAAGGTCTTCAGAGTTGTGGAAAAAGAGGATGGAACATCTTGCAAAACTTGGTGAAAGTGTGGAGAGTGCTGGCAGAAAAAGATTTATGATCCTTCAGAGAGCCAATGTGTCCTCATAG | 897 | 0.4482 | MKCFHYFRDKSRNGRQRSAPELKEKEKLDFSGAERVTKSSSSSASPRGIPELYEEKGQNLRVFSLSELKRATSDFNRLFKIGEGGFGSVFKGSIQPADGNGNPVVVAIKRLNKDALQVMGTYGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSMERNRPKSEKKLLEWVKQYPPDSKKFDTIIDQRLQGEYSKNGARKLAKLADHCLRKSAKDRLTMSQVVERLKQIMEDTSEADDRSVEVSENGQAEAEEKGNQLRSSELWKKRMEHLAKLGESVESAGRKRFMILQRANVSS | 298 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu9g01784 | 298 | MobiDBLite | consensus disorder prediction | 8 | 33 | - | - | |
Vimu9g01784 | 298 | PANTHER | OS01G0588500 PROTEIN-RELATED | 39 | 114 | - | - | |
Vimu9g01784 | 298 | SUPERFAMILY | Protein kinase-like (PK-like) | 60 | 226 | IPR011009 | - | |
Vimu9g01784 | 298 | Gene3D | Transferase(Phosphotransferase) domain 1 | 117 | 265 | - | - | |
Vimu9g01784 | 298 | MobiDBLite | consensus disorder prediction | 232 | 251 | - | - | |
Vimu9g01784 | 298 | Pfam | Protein kinase domain | 115 | 226 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu9g01784 | 298 | ProSiteProfiles | Protein kinase domain profile. | 1 | 232 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu9g01784 | 298 | Gene3D | Phosphorylase Kinase; domain 1 | 53 | 116 | - | - | |
Vimu9g01784 | 298 | ProSitePatterns | Protein kinases ATP-binding region signature. | 81 | 109 | IPR017441 | GO:0005524 | |
Vimu9g01784 | 298 | MobiDBLite | consensus disorder prediction | 8 | 50 | - | - | |
Vimu9g01784 | 298 | MobiDBLite | consensus disorder prediction | 232 | 263 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu9g01784 | Vimu-Chr9 | 27063333 | 27068689 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu9g01784 | 110 | 231 | Receptor kinase-like Gene Family | AT4G02010 | 40.164 | 1.00e-27 | 110 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Vimu9g01784 | Pkinase | 3.6e-15 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu9g01784 | - | - | gmx:100781858 | 301.212 |