Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01779 ATGTCCTTCAATCAATCAAAGGTGGAAAAGAACGACGTCGTTTACAGAAGAAACGGACGATCATCCACCTTTAACCAGCAAAGAGGTTCCTACGGCAAAGCTGCTGGCGATGGCGGTGGAATCGCGCCGTCAAACAATTCATTATCCACTGCCCGAAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGACAATCTCGGCTACATCCTTCCCAGGGAAATTCAACAGAGTCAAATAATGCATCTGCTGCTCGGAACATTAGTAATGGTATCCATGGACAGTCCCACTTACATGGTGCCCCAGATGGGCCAATTACAAAATCATCTGAATCATCAGCTGGACATAAGAGCACTGGAATTGTTCCAAAGGCTGAAACTGCTTCATTGCCCCCTTTAATTTCTGATCCAGTAATTCCCACAAGCCTTGCTAAGGGAGATGATGAGTCTAAGGCATTCCCTTTTCAATTTGGATCTATTGTTCCTGGCGTCATTAATGGGATGGCAATTCCTGCTCGTACAAGTTCAGCTCCTCCTAGTTTTGATAAGCAGAAGCCTGATCAGGCTCTTGATGACTCTGAAAAATCTGTGTCTTCGGGTCCAATTCCTCCTGTTCCAAAGCAGCAGAAATCACACGAGAAAGATGCTGGTGTCAATGAGCAATCTAACGTTGAGGAGATTAAGGCAAACAAGGATTCTGAGGTGTCAATTTTAACCTCAGTAAATCAGATGTCAAAACCCTTTGTTGCTCCTGTAACTGGGATTTCAATCTCAACTTCATATAACCAATCACAGGCTCCTTTACAGTTTGGAGGTGCTAATCCACAGATTCAATCTCATGGCATGACAACAACATCCATCCAAATGCCTATACCGATGCCTTTACCAATTGGTAATGCTACACAAGTGCAACAGCCAGTTTTTATTCCAGGTCTTCAACCTCATCCAATGCATCCTCAAGGGATCATGCATCAAGGCCAAAACATTAATTATTCTCCTCAAATGGGTAATCAATTAGGCAACATGGGCATTGGCATAGGTTGTCAATATCCACAACAGAAAGGAGGAAAATTTGCTAGTCCTCGAAAAACTACCCATGTAAAGATAACTCATCCTGAGACACATGAAGAGTTAAGACTTGATAAAAGGAAGGATGCATACTCAAATGGTGGGTCATCCTGTGTTAGACCACATCCTAACATACCTTCTCAATCCCAGCCTGTTAAATCTTTTCCGGCTTCTCATCCTATGAACTATTTTTCATCCAACTCATATAATACAAATTCTCCTTATTATCCACCTAATTCTCTCCCATTAACAAGTAGCCCAATGACTCCTAATTGTCAACCACCATCATTTAATTTTCCTCTCCACCATGGTCCCCAAGGTGTGAGTTTTATGAATTCAGCTGCACAAGGTTCCTCACCTACTAATAAAACTAGCACTCCAACAGGGATTACATCTATGACCAATAAGCCTAATGGTACAACTACTATAGTGGACTCTTCCTTGTCAAATTCCTGTATTGCTGATGTTCAAAATGGAGAATCCCCTGGTTCAACAATATCTTGTGATGTTAGCTCCTCTATGTTGCAAAAAGGATCGGAAACCTGTTCAGAAGTTTCTCCACAACAATCTAAGTTTTCTAGTGATTTTGTCACAGATGTGTCTAATAATGAAGGTGGAAAGGAATCTCTCGGTATCTCCAACTCTTTGAAGGATAAAAAACCAGGGAAGAAAGATCAAATATCACAAAATCAGGTTTCTGTACGATCTCCCACAATGGACACTATACGTTCTGGAGTTGTTGACCAAGTTATATCTGATATTGGAGTACCCGATGCTTTAGGAACTAAAAAAAATCATTCTGCAGCAATTACTATTGAAGATCTTCCAGGATCTGATACAATTTCTACTGGTGTTGAAGTGGAGACCAATGGGTCTGTAGAAGCTTCTGCTTACGTTTCAGTGGAAGGATGTGGTGCACAAAATATTGACAAAGTTCACAATCAGATGCCTGATAAGACATATAAATTAGTTGAAGGAAACTTTGGCTCATCAGATCTGCAGTCTACTGATCTTCCAAAAACGACACTAAAGCATGTTAAGAACGATTCAGAGAATGTTGATGTTGAGTCAGGTACCAAGGATAGACCAACTATAGAACCAAATAAGGTGAAAAACACATCTAAAGGAAAGAAGAAGAGAAGAGAGATACTTCAGAAAGCAGATGCCGCTGGGTCAACTTCTGATCTTTATAATGCATACAAGGGACCTGGGGAAAAGAGAGATGCCTTAAGTTCTGAGAGCAAGGAAAGTGTTACTATTCCTCTAAGCTTGAAACAATTTGATGTTGGTCAGTCTGATATTAAAGCCAGTGAGAAATGTGATCATAATAAAGTTGAGCTTGATGATTGGGAGGACGTTGCTGACATGTCTTCCCCTAAACTGGAGGTTCATGACATATCTCAAACAGTAGGTGAAGGACATGGAAGTACAACCAAAAAATATTCACGTGATTTCCTTCTGAAATTTGTAGAGCAGTGCATTGATCTTCCTGAAGGTTTTGAAATCACTGCAGACATTGGAGCTTTGATTAATGCCAATATTGGCGGCTCTCATATTTTTGAGCGTGATTCACATCCTAATCCTGGAAGAGCTGTAGGTGGGTTGTCTCGGATGGATCGTCGTGGCGATGTTATTATGGAGGAAGATAGATGGAACAGAGTTTCTGGTTCTTTTCGTTCTGGACGTGGTCCAGAAGGCACCGGAGGAAATTCAGGATTTCGATTTGGTCATGGAGGCAACTTTGGTGTTTTAAGGAACCCTCGTGCACAAACACCTCTACAATACGGTGGAGGGATCCTTTTTGGGCCAATGCAATCTGGGGGAAATCAAGGTGGAAGAAATAGCCCTAATGGGGAGAGATGGCAGCGATCTGCTAGCTTCCAACAGAGGGGTTTAATTCCTTCTCCAAACCAAACTCCTTTACAAATAATGCACAAAGCTGAGAATAAGTACGAAGTGGGTAAAGTGACAGATGTGGAAGAGGTAAAACAGAGGCAGTTGAAAGCTATCTTGAACAAACTAACACCACAAAATTTTGACAAACTCTTTGAACAGGTGAAAGAAGTTAATATTGACAATGCAATCACCCTCATAGGTGTCATTTCACAAATATTTGAGAAAGCTCTTATGGAACCTACCTTTTGTGAAATGTATGCCAACTTTTGTTTACATTTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAAAAAATAACTTTTAAAAGGTTATTATTGAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGGGAAGAAGAAGAAGCAAATAAGGCTGATGAGGGTGAGGTTAAGCAGTCTACCGAGGAAAGGGGAGAAAGAAGAGTTAAGGCAAGAAGACGAATGTTGGGAAACATTAGATTGATTGGAGAGCTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGTATCAAGAAGTTACTGGGTCAATATCAAGATCCAGATGAAGAAAACATTGAAGCTTTGTGCAAGCTAATGAGTACTATTGGGGAGATGATTGACCATCCAAAAGCCAAGGAACATATGGATGCATATTTTGAAAGAATGAAATTATTATCAATGAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAAGATGCCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTAGAAGGTCCCAAAAAGATTGAGGAGGTACATAGGGATGCTGCTCAGGAAAGACAATCCCATGCTGGTAGGTCAAATCGTGGTCCTGGTAACAATCAATCAAGTAGAAGGAATCCCATTGATTTTAGTCCAAGAGTGTCTTCTAATTCTCAAATGGGTGGATTATGTGGTCTTCCAACTCAAGCACGTGGGTATGGTGGCTCTCAGGATGCTCAATTTGAGGAACAACAATCTTATGAAGCTAAGACCTTGTCAGTTCCTTTGCCTCAAAGATCTTTAGGAGATGATTCTATAACCTTGGTACCTCAAGGTGGTCTTGCTAGGGGAATGTCTATGAGAGGATCAACCACAATTTCCAATCTGCCAATATCTGATGTGGTTCCTGTGCCTAGAGACCCTCATATAATGGCTGCAGGTCTTAATGGTCAGAGTAATTCAACAGAGCGCACACAATATAACTCAATGGAGGATCTTGAGTCAAGACTTGGTACTAACAGGTCTTTAGGTCCATCTATTCATGATCAATCAATTGCCCCTGAGCATAATGTAAACCATGGTAACAGAAACTTGAGGAGTGTTTCACATGCTGCTCAATTTCAAGGATCCATAGTTTCTCAGAATGCTTATTCAGATAAGATTGTGTCAGAAGAACAACTGGGAGACATGTCCTTGTCAGCCATAAGAGAATACTACAGTGCTAGAGATGAGAAAGAACTTGTTTTGTGTATCAAAGATTTGAACTCTCCAAGCTTTTATCCTTCTATGGTTTCTCTCTGGGTCACAGATTCATTTGAGAGAAAGGACACAGAAAGAGATCTTCTTGCCAAACTACTTATCAACCTTGTGAAATCTCAACATCACACCATAAGTCAAGTCCAACTCATCAAAGGGTTTGAATCTGTTCTCTGTACATTGGAGGATGTCATTAATGATGCCCCTAGAGCAGCTGAGTTTCTAGGCCGAATTTTTGCTAAAGTCATAATAGAGAGAGTAGCTACTTTTACTGAGATTGCACAATTAATACATGATGGTGGAGAAGAGCCAGGTAGTCTCTTAGAAATTGGACTTGCAGGTGATGTTCTTGGAAGCACGTTGGAGGTAATTCAAAATGAAAAGGGAGACGTGCTTCTAAATGAGATTCTTTCAGGAAGCTCTAATTTCCAATTGAAAACTTTCCAGCCACCTAATGCTAAAATATCAAGGAAATTGGAAAAATTTATTTAG 4965 0.4042 MSFNQSKVEKNDVVYRRNGRSSTFNQQRGSYGKAAGDGGGIAPSNNSLSTARSFNKKSNNAQGGQSRLHPSQGNSTESNNASAARNISNGIHGQSHLHGAPDGPITKSSESSAGHKSTGIVPKAETASLPPLISDPVIPTSLAKGDDESKAFPFQFGSIVPGVINGMAIPARTSSAPPSFDKQKPDQALDDSEKSVSSGPIPPVPKQQKSHEKDAGVNEQSNVEEIKANKDSEVSILTSVNQMSKPFVAPVTGISISTSYNQSQAPLQFGGANPQIQSHGMTTTSIQMPIPMPLPIGNATQVQQPVFIPGLQPHPMHPQGIMHQGQNINYSPQMGNQLGNMGIGIGCQYPQQKGGKFASPRKTTHVKITHPETHEELRLDKRKDAYSNGGSSCVRPHPNIPSQSQPVKSFPASHPMNYFSSNSYNTNSPYYPPNSLPLTSSPMTPNCQPPSFNFPLHHGPQGVSFMNSAAQGSSPTNKTSTPTGITSMTNKPNGTTTIVDSSLSNSCIADVQNGESPGSTISCDVSSSMLQKGSETCSEVSPQQSKFSSDFVTDVSNNEGGKESLGISNSLKDKKPGKKDQISQNQVSVRSPTMDTIRSGVVDQVISDIGVPDALGTKKNHSAAITIEDLPGSDTISTGVEVETNGSVEASAYVSVEGCGAQNIDKVHNQMPDKTYKLVEGNFGSSDLQSTDLPKTTLKHVKNDSENVDVESGTKDRPTIEPNKVKNTSKGKKKRREILQKADAAGSTSDLYNAYKGPGEKRDALSSESKESVTIPLSLKQFDVGQSDIKASEKCDHNKVELDDWEDVADMSSPKLEVHDISQTVGEGHGSTTKKYSRDFLLKFVEQCIDLPEGFEITADIGALINANIGGSHIFERDSHPNPGRAVGGLSRMDRRGDVIMEEDRWNRVSGSFRSGRGPEGTGGNSGFRFGHGGNFGVLRNPRAQTPLQYGGGILFGPMQSGGNQGGRNSPNGERWQRSASFQQRGLIPSPNQTPLQIMHKAENKYEVGKVTDVEEVKQRQLKAILNKLTPQNFDKLFEQVKEVNIDNAITLIGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREEEEANKADEGEVKQSTEERGERRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEENIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSMNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQSHAGRSNRGPGNNQSSRRNPIDFSPRVSSNSQMGGLCGLPTQARGYGGSQDAQFEEQQSYEAKTLSVPLPQRSLGDDSITLVPQGGLARGMSMRGSTTISNLPISDVVPVPRDPHIMAAGLNGQSNSTERTQYNSMEDLESRLGTNRSLGPSIHDQSIAPEHNVNHGNRNLRSVSHAAQFQGSIVSQNAYSDKIVSEEQLGDMSLSAIREYYSARDEKELVLCIKDLNSPSFYPSMVSLWVTDSFERKDTERDLLAKLLINLVKSQHHTISQVQLIKGFESVLCTLEDVINDAPRAAEFLGRIFAKVIIERVATFTEIAQLIHDGGEEPGSLLEIGLAGDVLGSTLEVIQNEKGDVLLNEILSGSSNFQLKTFQPPNAKISRKLEKFI 1654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01779 1654 MobiDBLite consensus disorder prediction 170 221 - -
Vimu9g01779 1654 MobiDBLite consensus disorder prediction 962 981 - -
Vimu9g01779 1654 MobiDBLite consensus disorder prediction 704 727 - -
Vimu9g01779 1654 MobiDBLite consensus disorder prediction 42 93 - -
Vimu9g01779 1654 MobiDBLite consensus disorder prediction 704 736 - -
Vimu9g01779 1654 SMART ma3_7 1466 1580 IPR003891 -
Vimu9g01779 1654 MobiDBLite consensus disorder prediction 960 981 - -
Vimu9g01779 1654 MobiDBLite consensus disorder prediction 1268 1303 - -
Vimu9g01779 1654 MobiDBLite consensus disorder prediction 534 592 - -
Vimu9g01779 1654 SUPERFAMILY ARM repeat 1461 1652 IPR016024 -
Vimu9g01779 1654 MobiDBLite consensus disorder prediction 1 141 - -
Vimu9g01779 1654 MobiDBLite consensus disorder prediction 1241 1267 - -
Vimu9g01779 1654 Pfam MA3 domain 1472 1577 IPR003891 -
Vimu9g01779 1654 MobiDBLite consensus disorder prediction 468 492 - -
Vimu9g01779 1654 SUPERFAMILY ARM repeat 1015 1243 IPR016024 -
Vimu9g01779 1654 Gene3D - 1457 1654 - -
Vimu9g01779 1654 MobiDBLite consensus disorder prediction 749 770 - -
Vimu9g01779 1654 SMART if4_15 1019 1241 IPR003890 GO:0003723|GO:0005515
Vimu9g01779 1654 MobiDBLite consensus disorder prediction 392 409 - -
Vimu9g01779 1654 MobiDBLite consensus disorder prediction 1111 1137 - -
Vimu9g01779 1654 MobiDBLite consensus disorder prediction 386 409 - -
Vimu9g01779 1654 ProSiteProfiles MI domain profile. 1465 1589 IPR003891 -
Vimu9g01779 1654 FunFam Eukaryotic translation initiation factor 4G 1459 1653 - -
Vimu9g01779 1654 FunFam Eukaryotic translation initiation factor 4G 1019 1254 - -
Vimu9g01779 1654 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 329 1653 IPR045208 GO:0003743
Vimu9g01779 1654 Coils Coil 1101 1121 - -
Vimu9g01779 1654 MobiDBLite consensus disorder prediction 534 565 - -
Vimu9g01779 1654 Gene3D - 1019 1254 - -
Vimu9g01779 1654 MobiDBLite consensus disorder prediction 1241 1319 - -
Vimu9g01779 1654 Pfam MIF4G domain 1019 1241 IPR003890 GO:0003723|GO:0005515
Vimu9g01779 1654 MobiDBLite consensus disorder prediction 207 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01779 Vimu-Chr9 26956117 26966414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01779 1 1653 Eukaryotic Initiation Factors Gene Family AT3G60240 44.778 0.0 1223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01779 K03260 - gmx:100798562 2363.96