Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01772 ATGGAATGCCGCCGCGGGAATTTCCGGCGAGGTCGGAGGAGGAGGAGTGGAGTAGAAGTGAGAAGCGCGCGCGATTTGAAGAAAGAAAAATTAGGACCATCTAGTAGACTTGTCACTCAAAGTATGGCTAAGAAGATCCGGGAAGGATGGAAAGCCTCTATGGCCCATTACGCCATCCCTAAAAGGTGTTCTTATTCTTCTCAAACCCTAGTTTTGCAGAATCCGCACACACCTCAACTCTGCAGCTCCTTCACTCTTCTCGTTTCACAGCTTCTGAAAATGACCAAGCGAACCAAGAAGGCTGGTATTGTTGGAAAATACGGCACCCGATATGGTGCTAGTTTAAGGAAGCAAATTAAGAAGATGGAAGTTAGTCAGCACAGTAAATTTTTCTGTGAGTTCTGTGGGAAGTACGCTGTTAAGAGGAAGGCTGTGGGCATTTGGGGTTGCAAAGACTGTGGAAAAGTGAAGGCTGGAGGTGCTTACACATTGAATACTGCCAGTGCCGTGACTGTCCGAAGCACCATTCGAAGGCTGAGGGAGCAGACCGAGAGTTAA 558 0.4785 MECRRGNFRRGRRRRSGVEVRSARDLKKEKLGPSSRLVTQSMAKKIREGWKASMAHYAIPKRCSYSSQTLVLQNPHTPQLCSSFTLLVSQLLKMTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01772 185 NCBIfam ribosomal protein eL43 94 184 IPR002674 GO:0003735|GO:0005840|GO:0006412
Vimu9g01772 185 Gene3D - 94 185 IPR011331 GO:0003735|GO:0005840|GO:0006412
Vimu9g01772 185 SUPERFAMILY Zn-binding ribosomal proteins 103 175 IPR011332 GO:0006412
Vimu9g01772 185 PANTHER ZGC:171772 90 184 - -
Vimu9g01772 185 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 97 165 IPR002674 GO:0003735|GO:0005840|GO:0006412
Vimu9g01772 185 Pfam Ribosomal L37ae protein family 97 181 IPR002674 GO:0003735|GO:0005840|GO:0006412
Vimu9g01772 185 FunFam 60S ribosomal protein L37a 95 185 - -
Vimu9g01772 185 MobiDBLite consensus disorder prediction 1 24 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01772 94 185 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 93.478 5.26e-59 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01772 K02921 - cit:102618361 192.586