Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01746 ATGGTCTACACAGGATTGTTTCCCAAAAAGAGGCGGGAAACTTGGTCCAAACACAAAACCCCCAATCAAAGAATCCAAAACACTCTTTTCTTTACTTCTCTTCCCGCTTCTCTCTCCTTCTCTCCCTCCAAACCAAACCTTGTTGCACCACATTGCATTGCAAACACGGAGAGATCCGAATCTGGATCCATGGCTGAGTGCGAATTCGATCTCGATCTCAAAGAGAAATCATGGCATCTCTTTGCACTCCTTCTGCGAATTGGCCACGCAGTCTATCCGTCACGCCTAGCCGCAGAGTGTCGTTTATTTGCTGCCTCGCCAGACTTTGTCTGCTACGTCAGTTCTCTCTCTGGTTCACCACTCTGTGTCACTGACAATGGACTCGTCACGCCCTCTGTTAGTGCGGTTTTTGCACTTGGAAGCTTCTTCTCTGTCCGTCTCTCCTCTGAGCAGCAAACGCATCGTTTTAGGAAACGCAAGTTGCTATTGGACTCGGCGGAAGATGGAATAGAACATAAAAGGTTAGCAATTGGAAATGGAATTCGGGAAATATCGTTCCAGAGTTTTGCTGATGTTGCAGAGACTCTGATGAGAAGAAACTTCCCTGTAATAAAATTTGAATCACAGAATATAGGTAGCGGGAATTTTGTATTCCCCTTGCGTGTTGATAAAAATGAAAAATGTTCTGGTTGTCTAATGCCAAATTTTAAACATAGGCATGATGTCAGCCCAACCATGTCTAATGAAGAGGTTTCTAAATCAATTATCAAAGACTTAAACCGTCCAAAGCTAGCGGACGTAAATAGATTCATGGCATGTAATCTCCGTGTTGATCGTGCCATGTTAGAACCCTCAATATGCAAGAACGGCATTGATGTTAAAAGCTTTGGATTTGGAAAGAAAATGGATTGTTTTGATGCATTTACGCATGACAGAACTGAACTAAATAGTATTAATCATGTGGCAAGTGGTACGGGTGAAAGTAATGTATGCAGAAATCCACCACGAAGACCTAATGAAGATGATGAGGTGCAAAGTGGTTCAAAGAAGGAGCTTATTGATACTGGCTCAAATAGAGACAAGCAAGATGTTACTCAGATGGTCAATGCTTCACTCTGTGGAGAAGAATTAACTAATGGTTTGCAACAAAAGAACCCATGTCTTGCAATAAATTTGGAAACAATGGAGGGTGAGAGAAACATAATAACTAATTCCTCTTTAATTCCCAAGCGGTCTTTGAAATCTTCTAGCACATTAATGGGGGGACAGAAGAACGGTCTAAACCCCAAGTCACTGATTCTTAAAGAGTCACCAGCCAGCAACAAATATAATAATGTTCCACAAAATGTTGATCAATTTAAAAATGATCAGAAACTTGCAACACGGAAGCAAAATCATAAAGAGAACAAGGCAGAAAATATTCGCGCTACTACTAAGGTGGAGAAAAAAGCATATCCATCCTTTGAAGCTTTTATAGTAGAGGAAGAAGAAGGTTCAGGTGGTTATGGCACTGTTTACCGTGCTCAAAGAACTACTGATGGAAAACGGGTTGCAATAAAATGTCCTCATAGTAATGCTCATAAAAATCACGTAACTACTGAACGGACTATGCTCGAGCGTTTTGGTGGTAAAAACTTCATAATAAGATATGAAGGTTCTTTAAAAAATGACAATACGGAATGCTTTGTTTTAGAGCATGTTGAGCACGAGAGACCTGAGGTTTTGAAAAAGGAAATTGATTTATTACAGATTCAATGGTACGGTTATTGCCTATTCAGGGCCCTTTATTGTTTGCACAAAGAGGGAGTTGTTCACAGAGACGTTAAACCTGGAAACTTCCTTTTCTCTCGAAAGCAAAACAGAGGTTACCTTATTGATTTCAACCTAGCCATGGATTTGAAGCAGAAGAACAAAGTTGGAAGTAAATCAAAACCCAACCTGGTTGCATCATCCCATAATGTTTCTCTTGCTTCTCGTTCTGCTCCTTTGGTCCGAGGCAAGAACCTTGGAGGCAGCAAGTCTTTAACATCCAATAAAAGGGCATTTGCAGATTATAAGAATTATTCTGAACTTAATAGGCATGTAAAACAAAAGGCTTTTATTGGTCCTCAGAAAAATGGTCCCGACATGGTTGGTGGGAGTTTTCCTAGAGCACAAGGAACAGACGGCTCGGGTATAACTTCTGCTAGAGATGCTAGCACTAGGACTGCTTCTGCAGAGAGGCTCAGGGAACCTTTACCTTCCCACGGAAGAAAGGAGCTTATCAGCTTTGTGAATACTATGAAATGTACAAACAACAATTCAATAATAGGTCCTTCCTCTCAAAGGAAAAGGGTTACTGCTCCCTCAAGCAGGGTAGATGGCAAGATTTTTCATATTACCCCAATGCCTCTGCATTCATCTGCCGTTGGTGCGGTATTATTGAGAAGCAAAGTAGATGGAAAACAGAAAAAAGAAGGTTCATGTGTTGGAACCAAAGGATTCCGTGCACCGGAGGTTTTGTTAAGATCTCAGCATCAGGGACATAAGATTGATATTTGGTCAGCTGGCGTCACTCTACTCTACATGGTGATTGGGAAGAGTCCTTTCACTGGCGACCCGGAACAGAATATAAAAGAAATTGTAAAATTGCGGGGCAGTGAAGAGTTTTGGGAAGTGGCCAAGCTACATGACCGTGAAGTGTCTTTTCCTGTGGAGTTACTTGATGAGCGATACTTGCAGTCATGGAACTTGGAAGCCTGGTGCAAAACTCACACAAAGAGACCAGAATTTCTTGAACAGATCCCGAAATCGTTGTTTGATTTGATAGACAAGTGTCTAACAGTTAATCCAAGAAATAGACTTAGTGCTGAAGATGTTCTCAGACATCAATTCTTTGACTCACTAAACGACACTCTGAGGAAGCAAAGAATGATACAACGTGCTATCAGATCAGAGGCTGCAGCAGCTTCTGCTGCAATCTGA 2964 0.4143 MVYTGLFPKKRRETWSKHKTPNQRIQNTLFFTSLPASLSFSPSKPNLVAPHCIANTERSESGSMAECEFDLDLKEKSWHLFALLLRIGHAVYPSRLAAECRLFAASPDFVCYVSSLSGSPLCVTDNGLVTPSVSAVFALGSFFSVRLSSEQQTHRFRKRKLLLDSAEDGIEHKRLAIGNGIREISFQSFADVAETLMRRNFPVIKFESQNIGSGNFVFPLRVDKNEKCSGCLMPNFKHRHDVSPTMSNEEVSKSIIKDLNRPKLADVNRFMACNLRVDRAMLEPSICKNGIDVKSFGFGKKMDCFDAFTHDRTELNSINHVASGTGESNVCRNPPRRPNEDDEVQSGSKKELIDTGSNRDKQDVTQMVNASLCGEELTNGLQQKNPCLAINLETMEGERNIITNSSLIPKRSLKSSSTLMGGQKNGLNPKSLILKESPASNKYNNVPQNVDQFKNDQKLATRKQNHKENKAENIRATTKVEKKAYPSFEAFIVEEEEGSGGYGTVYRAQRTTDGKRVAIKCPHSNAHKNHVTTERTMLERFGGKNFIIRYEGSLKNDNTECFVLEHVEHERPEVLKKEIDLLQIQWYGYCLFRALYCLHKEGVVHRDVKPGNFLFSRKQNRGYLIDFNLAMDLKQKNKVGSKSKPNLVASSHNVSLASRSAPLVRGKNLGGSKSLTSNKRAFADYKNYSELNRHVKQKAFIGPQKNGPDMVGGSFPRAQGTDGSGITSARDASTRTASAERLREPLPSHGRKELISFVNTMKCTNNNSIIGPSSQRKRVTAPSSRVDGKIFHITPMPLHSSAVGAVLLRSKVDGKQKKEGSCVGTKGFRAPEVLLRSQHQGHKIDIWSAGVTLLYMVIGKSPFTGDPEQNIKEIVKLRGSEEFWEVAKLHDREVSFPVELLDERYLQSWNLEAWCKTHTKRPEFLEQIPKSLFDLIDKCLTVNPRNRLSAEDVLRHQFFDSLNDTLRKQRMIQRAIRSEAAAASAAI 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01746 987 FunFam Probable serine/threonine-protein kinase DDB_G0291918 483 646 - -
Vimu9g01746 987 MobiDBLite consensus disorder prediction 334 358 - -
Vimu9g01746 987 SUPERFAMILY Protein kinase-like (PK-like) 485 964 IPR011009 -
Vimu9g01746 987 Pfam Protein kinase domain 494 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu9g01746 987 Pfam Protein kinase domain 817 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu9g01746 987 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 432 972 - -
Vimu9g01746 987 Gene3D Transferase(Phosphotransferase) domain 1 453 651 - -
Vimu9g01746 987 MobiDBLite consensus disorder prediction 720 735 - -
Vimu9g01746 987 MobiDBLite consensus disorder prediction 701 741 - -
Vimu9g01746 987 SMART serkin_6 491 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu9g01746 987 Gene3D Transferase(Phosphotransferase) domain 1 805 985 - -
Vimu9g01746 987 FunFam Kinase like protein 799 970 - -
Vimu9g01746 987 MobiDBLite consensus disorder prediction 319 361 - -
Vimu9g01746 987 ProSiteProfiles Protein kinase domain profile. 491 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu9g01746 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 603 615 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01746 Vimu-Chr9 26690605 26698437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01746 823 963 Core Cell Cycle Gene Families AT2G38620 33.557 4.67e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Vimu9g01746 Pkinase 2.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01746 K02214 - gmx:100783107 1400.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g01746 9 26690605 26698437 Vimu9g01746 9 26690605 26698437 ECH