Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01697 ATGGGAGAGGGGTCTGTTGAACTTGATGCTATTATAAAGGAAGCTGTTGATCTGGAGAACATTCCTCTTGAAGAGGTTTTTGATAATCTCAAATGCACAAGAGAAGGTTTAACCTCTCAGCAAGTACAAGAGAGGCTAGACTTGTTTGGATACAATAAGCTTGAAGAAAAGAAGGAAAGTAAGATACTGAAGTTTTTGGGGTTTATGTGGAATCCTCTGTCATGGGTTATGGAAGCTGCTGCTATCATGGCCATAGGCATGGCACATGGAGGGAATGAAAGAGCAGATTATCAAGATTTTATTGGCATAGTTCTTTTGCTACTTATAAACTCCACCATCAGTTTCATAGAAGAAAACAATGCTGGCAATGCAGCTGCTGCCCTTATGGCCAGATTAGCCCCAAAAGCAAAGATTTCTCTACCAATATCTTTGTTATACTGTTTTGTTTACATTTCCTTTGGCATCCAATTACATTTACAGGTACTTCGTGATGGAAAATGGAGTGAAGAAGAAGCTTCGGTGTTGGTTCCTGGAGACATAATTAGCATCAAGCTTGGTGACATAATTCCTGCTGATGCACGTCTCCTTGAAGGTGATCCTTTGAAGATTGATCAGTCTGCTCTTACTGGGGAGTCACTTCCTGTCACCAAACACCCTGGAGAAGGAGTATATTCTGGTTCAACCTGCAAGCAAGGAGAAATTGAGGCAGTGGTTATTGCAACCGGAGTTCACACCTTTTTTGGGAAGGCAGCTCATCTTGTGGAGAACACAACACATGTTGGACATTTCCAGCAGGTTCTAACATATAGAATTTGTAGTGCTCTTGATGTTGTGCAATTGAATGTTGTCTCAAGTAAAGTCATTTCCGTTCTAACATCTATTGGGAACTTCTGCATCTGTTCAATTGCTGTTGGTATGGTCATTGAAATCGTTGTGATATATGCAATCCATAAAAAGGGATACAGAAATGGTATTGATAACCTTCTGGTGCTATTAATTGGTGGCATCCCTATTGCAATGCCAACAGTCCTTTCTGTTACAATGGCTATTGGTTCACACCGGTTATCTCAGCAGGGTGCCATAACAAAGAGAATGACTGCTATTGAAGAGATGGCTGGAATGGATGTATTATGCAGTGACAAGACAGGCACATTAACTCTTAACAAGCTTTCAGTGGACAAGAATATTATTGAGGTTTTTGTTAAAAACGTTGACAGTGATATGGTTGTACTTATGGCCGCAAGAGCATCAAGGCTAGAGAATCAGGATGCAATTGATGGTGCTATAGTTTCAATGTTAGCAGACCCAAAGGAGGCAAGAGCTGGAATAAAAGAAGTTCACTTCCTTCCATTCAATCCAACTGATAAAAGAACTGCACTAACATACCTTGATGCTGCTGGTAAGATGCACAGGGTTAGCAAAGGAGCACCAGAGCAGATTCTCAATCTTGCATATAACAAATCAGAAATACAACAAAAGGTTCATGCAATTATTGACAAGTTTGCAGAACGTGGACTTCGTTCTCTTGCAGTTGCCCGCCAGGAAGTACCTGAGGGAAATAAAGACAGTCCAGGAGGACCATGGGAATTTGTTGGCCTTCTGCCTCTTTTCGATCCACCTCGCCATGATAGTGCAGAAACAATTAGAAGAGCTCTTGATCTTGGCGTGAGTGTCAAAATGATCACTGGTGATCAACTTGCAATAGGTAAGGAAACAGGAAGACGTCTTGGGATGGGGACTAACATGTATCCTTCTTCATCGCTACTTGGTGAAAATAAAGATGGATTGGGTGCTGTCGCTGTTGATGATCTCATTGAGAATGCTGATGGTTTTGCTGGAGTCTTCCCTGAGCACAAGTATGAGATTGTGAAGAGGTTACAAGCTAGAAAACACATTTGTGGGATGACTGGTGATGGGGTGAACGATGCACCTGCCTTGAAGATAGCAGACATAGGAATTGCTGTAGCAGATGCTACAGATGCTGCCAGAAGCGCATCTGACATAGTCCTAACAGAACCTGGGTTGAGTGTGATCATAAGTGCAGTTTTAACTAGCCGTGCAATTTTCCAGAGAATGAAAAATTACACAATATATGCCATATCTATCACTATTCGTATTGTGCTTGGTTTCATGTTACTGAACAGCTTTTGGAAATTTGACTTTCCTCCCTTCATGGTTCTTGTCATTGCCATTCTCAATGATGGTACCATCATGACAATATCTAAAGATAGGGTTAAGCCCTCTCCATTTCCTGATAGTTGGAAGCTTAGTGAAATTTTTGCAACTGGGATTGTTCTTGGCAGCTATCTGGCTCTAATGACTGTGATCTTCTTCTATATAGTTGTTGAAACAGACTTCTTTCCTAACAAATTTGGCGTGAGACACTTTCATTATGATGCAAATGCTGAGGACAGTGATCCAACCAAAAGTATGTTGGGATCTGCTGTCTATCTTCAAGTTAGTACCATTAGTCAAGCCTTAATTTTCGTGACAAGGTCAAGGGGTTGGTCCTACACAGAAAGACCTGGTCTTTTGCTTGTCACTGCCTTCATCATTGCTCAAGCGATTGCTACTGTTATATCTGCCACTCTCACTTGGGATGTTGCCGGGATCAGAAGAATCGGTTGGGGCTGGACAGGAGTTATTTGGCTTTACAATACTACCGCATTCATCAACAAAAATGACTTTGGAAGAGAAGCTCGTGAGGCTGCATGGGCTACTGAGCAGAGAACCTTACATGGCCTCCAATCTGCTGAGCCGAAAGGGTTTACAGATAAGCACACCTTCAGAGAAATTAATACATTGGCAGAAGAAGCAAGGAGAAGAGCAGAGATAGCAAGGCTGAGAGAGCTTCACACTCTGAAAGGTAGAGTGGAATCATTTGCCAAGCTAAGGGGTTTGGACATAGATGCCATGAACGGACACTACACTGTCTAA 2937 0.4202 MGEGSVELDAIIKEAVDLENIPLEEVFDNLKCTREGLTSQQVQERLDLFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIGMAHGGNERADYQDFIGIVLLLLINSTISFIEENNAGNAAAALMARLAPKAKISLPISLLYCFVYISFGIQLHLQVLRDGKWSEEEASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGEGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHFQQVLTYRICSALDVVQLNVVSSKVISVLTSIGNFCICSIAVGMVIEIVVIYAIHKKGYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNIIEVFVKNVDSDMVVLMAARASRLENQDAIDGAIVSMLADPKEARAGIKEVHFLPFNPTDKRTALTYLDAAGKMHRVSKGAPEQILNLAYNKSEIQQKVHAIIDKFAERGLRSLAVARQEVPEGNKDSPGGPWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGENKDGLGAVAVDDLIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAISITIRIVLGFMLLNSFWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPFPDSWKLSEIFATGIVLGSYLALMTVIFFYIVVETDFFPNKFGVRHFHYDANAEDSDPTKSMLGSAVYLQVSTISQALIFVTRSRGWSYTERPGLLLVTAFIIAQAIATVISATLTWDVAGIRRIGWGWTGVIWLYNTTAFINKNDFGREAREAAWATEQRTLHGLQSAEPKGFTDKHTFREINTLAEEARRRAEIARLRELHTLKGRVESFAKLRGLDIDAMNGHYTV 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01697 978 Pfam E1-E2 ATPase 159 357 - -
Vimu9g01697 978 Gene3D - 157 241 - -
Vimu9g01697 978 CDD P-type_ATPase_H 36 891 IPR006534 GO:0008553|GO:0016020|GO:0120029
Vimu9g01697 978 FunFam Plasma membrane ATPase 390 537 - -
Vimu9g01697 978 Gene3D - 67 121 - -
Vimu9g01697 978 Gene3D - 375 673 IPR023214 -
Vimu9g01697 978 SFLD p-type atpase 360 687 IPR044492 -
Vimu9g01697 978 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 890 IPR023298 -
Vimu9g01697 978 Pfam haloacid dehalogenase-like hydrolase 374 650 - -
Vimu9g01697 978 Gene3D - 35 138 - -
Vimu9g01697 978 SUPERFAMILY Calcium ATPase, transduction domain A 158 254 IPR008250 -
Vimu9g01697 978 NCBIfam HAD-IC family P-type ATPase 611 713 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu9g01697 978 SFLD C1.7: P-type atpase like 360 687 - -
Vimu9g01697 978 NCBIfam plasma-membrane proton-efflux P-type ATPase 282 862 IPR006534 GO:0008553|GO:0016020|GO:0120029
Vimu9g01697 978 FunFam Plasma membrane ATPase 530 684 - -
Vimu9g01697 978 SUPERFAMILY HAD-like 374 683 IPR036412 -
Vimu9g01697 978 PRINTS P-type cation-transporting ATPase superfamily signature 636 655 - -
Vimu9g01697 978 PRINTS P-type cation-transporting ATPase superfamily signature 204 218 - -
Vimu9g01697 978 PRINTS P-type cation-transporting ATPase superfamily signature 554 564 - -
Vimu9g01697 978 PRINTS P-type cation-transporting ATPase superfamily signature 659 671 - -
Vimu9g01697 978 PRINTS P-type cation-transporting ATPase superfamily signature 532 543 - -
Vimu9g01697 978 PRINTS P-type cation-transporting ATPase superfamily signature 378 392 - -
Vimu9g01697 978 Gene3D - 927 978 - -
Vimu9g01697 978 PANTHER CALCIUM-TRANSPORTING ATPASE 19 138 - -
Vimu9g01697 978 Gene3D - 390 537 IPR023299 GO:0000166
Vimu9g01697 978 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Vimu9g01697 978 Gene3D - 156 871 - -
Vimu9g01697 978 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Vimu9g01697 978 PRINTS H+-transporting ATPase (proton pump) signature 817 838 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu9g01697 978 PRINTS H+-transporting ATPase (proton pump) signature 636 652 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu9g01697 978 PRINTS H+-transporting ATPase (proton pump) signature 494 512 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu9g01697 978 PRINTS H+-transporting ATPase (proton pump) signature 608 624 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu9g01697 978 PRINTS H+-transporting ATPase (proton pump) signature 667 692 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu9g01697 978 FunFam Plasma membrane ATPase 157 241 - -
Vimu9g01697 978 ProSitePatterns E1-E2 ATPases phosphorylation site. 380 386 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01697 Vimu-Chr9 26100807 26108202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01697 1 978 Primary Pumps ATPases AT5G62670 73.413 0.0 1447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01697 K01535 - gmx:100794938 1632.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g01697 9 26100807 26108202 Vimu9g01697 9 26100807 26108202 ECH