Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01619 ATGTTGCTTTTCAAACTTGCAACTTCCTGTAGCGTTGTGCTATGCTGCCGTGTTGCACCCTTGCAGAAAGCAGGAATTGTTGATCTGATAAAAAGCCGCACAGATGACCTGACATTAGCTATTGGTGATGGGGCAAATGATGTGTCGATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGGCGCCAAGCTGTGATGGCATCAGATTTTGCCATGGCACAATTCCAGTTCTTGAAAAAATTGCTTCTGGTTCACGGACACTGGAATTATCAGCGTGTTGGTTATCTTGTTCTGTACAACTTTTACCGCAATGCTGTCTTTGTGTTGATGCTATTCTGGACTATTTATCATTTGGCAAGTTCCCCTACATATTGGATGACAATTTTTCTTATAATAATCGTGGCATTGCTACCTCGCTTTTCTTGCAAAGCTTTTTATCAAGCCTTTTGTCCTTCAGATATCCAGATAGCCAGAGAAGCTGAGACAATGATAAAACAGCATGGTAATTTGCAACCAATGAGTCCAGTTTCCAAATAA 549 0.4171 MLLFKLATSCSVVLCCRVAPLQKAGIVDLIKSRTDDLTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMAQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWTIYHLASSPTYWMTIFLIIIVALLPRFSCKAFYQAFCPSDIQIAREAETMIKQHGNLQPMSPVSK 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01619 182 Gene3D - 2 81 IPR023214 -
Vimu9g01619 182 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 116 165 - -
Vimu9g01619 182 NCBIfam HAD-IC family P-type ATPase 11 121 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu9g01619 182 SUPERFAMILY HAD-like 7 89 IPR036412 -
Vimu9g01619 182 Pfam Phospholipid-translocating P-type ATPase C-terminal 69 117 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01619 Vimu-Chr9 25422819 25424513 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01619 116 180 Primary Pumps ATPases AT5G04930 33.846 3.76e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01619 K14802 - egr:104425118 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00193 6 2517829 2523717 Vimu9g01619 9 25422819 25424513 PCT