Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01588 ATGAAGATACATTTGTCTGAAGAAGATATAGAGGATGGGATTGGAAGAAGAGGTGACAGAGTATGGAAGTTTGAGATAAAGGATATCTTAAGATTTTGGAAGAAACCTTCAAACGGTAGTGGAAGGCATATGGAAGGAGGTCGAACACGTGGAGGCGCTAATGCTTGTCCTTTGAAGGTCAAAGAAGGTGTTGTGGTTGTCCTAAAGGTAGAAGACCGTGTCGATAAGATGTCTAAGGAGGTGAATAAGCAAATTGTTGTGGCAACAAATAATTCTGTTGATTGTAGTGATGCATTTAACACCACAGAGATTTTTCCTTCTCGAGATGCAATGTTAAATTGGGCTCGCGATGTTGCAAAGGAGAATGGATTTGTCCTTATTATTTTGAGATCAGAGACATCTACAAAACCTACAAGAACTACAAGACGTAATCAAAGGAAGACATTTGTAATTTTGGGTTGTGATAGAAGTGGAAAATATAGAGGACTATACAAGAATGAATTATCCCAAAAGGTAAATAGTACTAGAAAATGTGAGTGTCCCTTCAGGTTAAGGGGAAAAGCTTTGAAAAAGGCTGAAGGATGGACTGTTAAGGTAATGTGTGGTTGTCACAATCACGAATTGGAAGAAACATTGGTGGGTCATCCCTATGCAGGCCGGTTGAGTGCTGAAGAGAAGTCTTTGGTTGATGATATGACAAAGAACATGATGAAGCCAAAAGATATACTTTTGACATTGAAAGATTATAATATGGATAATGTAACTACCATCAAGCAGATTTACAATGCTCGACATGCTTATCGATCCTCTCAAAAAGGTTTAGAAATGCAATACCTTCTGAAATTATTGGAACGTGAGCGGTATGTGTACTGGCATAGAAAGGTGGATGATTCCAATGTTATCAGAGATATATTCTGGACACATCCAGATGCCATTAAACTTCTGGGTGCTTTCAACACTGTCTTGATAATTGATAGTATTTACACAACCACTAGGTATCCATTGCCACTGCTTGAGATTGTTGGTGTTACTTCAACTGAGTTAACATTCTCTGTGGCTTTTGCTTTTGTGGAGTCTGAGCTAGCTGACAACTTCACTTGGGCACTACAGAAGTTAAGAGGATTGATTGTTAAAGACGAAGACATACCTCAGGTGATTGTGACTAACAGAGACATTTCTTTGATGAATGCAGTGCAAGTTGTCTTTCCGAGCTCTTCTAATTTGTTATGTCGGTCTCATATCAACAAGAATGTGAAGTCCAAATGCATGTCAATAGTCCATCCAAAGGAGAAACAAGACTTGGTGATGAATGCATGGGATGTTGTTGTGAATTCTTCTAATGAGAGTGAGTATATGCAGCGACTGGCACTATTTGAAAAAGTTTGCTCTGGTTTTCCTAATTTTGGTGAATATGTGAAAAATATGTGGCTGATTCCACACAAGGAAAAATTTGTCACTTCATGGACAAATCAGGTGATGCATTTGGGTAACACAACAACCGATAGGGTTGAGTCAACAAATTGTAAGTTAAAGAATTTGCTTCAAGATAGCAAGGAAGATATGTGTAGTTATTGGGATGCTATGAATGACATGATTACTTTGCAACACACCGAGATTAAGTTGTCATTTGAGAAAAGCATAAATGTAGTGGATCATATGCATAATACTCCGTTATACATCAAACTGCAAGGACTTGTATCAAGGAGTGCATTGAGTCATATAACTGATGAGTATGACCGAGTTAAGGCTGTTGGTACTGATAGTTCTAAATGTTATTGCATAGTTAGAACTACACACGGTCTTCCTTGTGCATGTGAACTTGCTAAGTACAGCACAATGTGTCATCCTGTTCCCTTGGAGGCAATTCACGTTCACTGGAAGAAGTTAAACTTTATTGATGGAGGAATGAATGATGAGGAGTATGAGTTATCGTTGCAACCTGAATTGGATGCCTTGCTCAAGAGATTTCAGGAACTTGATTGTGCTGGGAAATTAGTTCTAAAGGCTAAATTACATGAACTAGCATTTCCTGATACAACTTCAAAGTGTCCAACTCCCACAGTGGTAAGAATAAAGGGTGCTCCAAAAAGAGACAGATCAATTCATTCTGATATTTCACAATGGGGGCATGTTGACGCAATGCGTCCTACCCATAGTGGCTCTTCATCTTGCCCTTCATCTCATCTAGTCCATGATTCTAAGCGAAGAAGAGTTTTGTCAATGATGGACCAATTTCCGATTCAGATCCATCCATTTATTGAAGAAATTATCGATGTGAAAGCAGATTCAAATTGTGGTTATCGCGCTGTTGCTGCTCAGCTTGGTATGGGTGAGGAATCGTGGGCTTTAGTTCGTCAGGATTTGATCAGAGAGCTTCAGCAGTGGCAAGATATTTATGCCAAACTCTTTGGTAGCAATGATCGAGTGGCTGAACTGAGGCAATCTTTGTATGTTGACAAGGAGACATCTATTAAAAAGTGGATGACTATACCAGATATGGGTTATGTAATTGCCTCAAGATACAACGTGGTTCTAGTTGCTTTATCCTTGAAGGAGTCCATGACATTTTTCCCTCTCAGAGGACGACCACCACTATCTGAGTCAAGGCACCGACTTATTGCCATTGGGTTGGTCCATGATTGTCACTTTGTACAGGTTGCTTTGAAGGCTGAGTCGCCATTACCTCCCACTGCTTTGCAGTGGTCGAGATACTGCAGTGCTGAATCTCGTTTTTTAAGAGATAACGATTCAACATCTGCAGATGATGAAATTAGAGAGATTAGTGAAGATGATGAAATTGAAGAGATCTTGAATGAACCTTTGCCTGAAGGCGAATATGCCAATGACTCAACTCTTTACAAAGGTAAATTGTTTAACGACTAG 2883 0.394 MKIHLSEEDIEDGIGRRGDRVWKFEIKDILRFWKKPSNGSGRHMEGGRTRGGANACPLKVKEGVVVVLKVEDRVDKMSKEVNKQIVVATNNSVDCSDAFNTTEIFPSRDAMLNWARDVAKENGFVLIILRSETSTKPTRTTRRNQRKTFVILGCDRSGKYRGLYKNELSQKVNSTRKCECPFRLRGKALKKAEGWTVKVMCGCHNHELEETLVGHPYAGRLSAEEKSLVDDMTKNMMKPKDILLTLKDYNMDNVTTIKQIYNARHAYRSSQKGLEMQYLLKLLERERYVYWHRKVDDSNVIRDIFWTHPDAIKLLGAFNTVLIIDSIYTTTRYPLPLLEIVGVTSTELTFSVAFAFVESELADNFTWALQKLRGLIVKDEDIPQVIVTNRDISLMNAVQVVFPSSSNLLCRSHINKNVKSKCMSIVHPKEKQDLVMNAWDVVVNSSNESEYMQRLALFEKVCSGFPNFGEYVKNMWLIPHKEKFVTSWTNQVMHLGNTTTDRVESTNCKLKNLLQDSKEDMCSYWDAMNDMITLQHTEIKLSFEKSINVVDHMHNTPLYIKLQGLVSRSALSHITDEYDRVKAVGTDSSKCYCIVRTTHGLPCACELAKYSTMCHPVPLEAIHVHWKKLNFIDGGMNDEEYELSLQPELDALLKRFQELDCAGKLVLKAKLHELAFPDTTSKCPTPTVVRIKGAPKRDRSIHSDISQWGHVDAMRPTHSGSSSCPSSHLVHDSKRRRVLSMMDQFPIQIHPFIEEIIDVKADSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDIYAKLFGSNDRVAELRQSLYVDKETSIKKWMTIPDMGYVIASRYNVVLVALSLKESMTFFPLRGRPPLSESRHRLIAIGLVHDCHFVQVALKAESPLPPTALQWSRYCSAESRFLRDNDSTSADDEIREISEDDEIEEILNEPLPEGEYANDSTLYKGKLFND 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01588 960 CDD OTU 755 883 - -
Vimu9g01588 960 PANTHER SWIM-TYPE DOMAIN-CONTAINING PROTEIN 102 518 - -
Vimu9g01588 960 ProSiteProfiles OTU domain profile. 754 889 IPR003323 -
Vimu9g01588 960 MobiDBLite consensus disorder prediction 941 960 - -
Vimu9g01588 960 Pfam MULE transposase domain 321 417 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01588 Vimu-Chr9 25213940 25232950 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vimu9g01588 MULE 5.9e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01588 - - gmx:100805365 1344.33