Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01581 ATGAATGGTAAATATACGATGGTGGGAGAATCAAGAAAATGGGTGATTCTCGGAGCATCGATATGGTTGCAGGCATTCACCGGCACGAACTTTGATTTCTCATCGTACTCTTCGAATTTGAAATCTGTGCTTGAGATAACTCAGCTTCAGCTGAACTATCTCTCTGTGGCCTCAGACATGGGTAAGGCCTTTGGGTGGTGCTCTGGTCTCTCTCTCCTTCATTTTCCTTTCTGGGTCGTTCTCTTCATCGCTGCTTTCATGGGACTCTTTGGCTATGGCTTCCAATGGCTTCTCATCCACCGCTTCATCACTTTGCCTTATTCTCTTGTTTTCTTTCTCTGTCTGATTGCTGGCTGCAGCATCTCTTGGTTCAACACCATCTGCTATGTCCTATGCATCAGACATTTTCCTACAAACCGTTCACTTGCATTATCCTTGAGTGTTAGTTTCAATGGTGTGAGTGCAGCTTTGTACACTCTCATTGCCAATGCAATAAACTCAAACGATGACACTCTCTACCTATTACTCAATGCAATACTTCCAGTGCTGATATCTCTTCTAGTACTCATCCCAATTCTCCATCAACCAAAGCCTCAACCACATTCTATTGACACCATTAAGCATGATTCATCAATCTTCCTCTGCCTCAACATCCTTGCCCTTGTAACTGGCCTCTACCTCATCTTCCTATATTCCTTCTCTTACACACTTGCCACTGCTCGTGTAATCCTTGTAGGTGCCCTTTTTCTCCTTGTGCTGCTCATTTTTGTTCCTTCTCTTGTCTATTCTATGAAATCTTCTGGCTTTTCTCTCTCCACAAGCTTTTCCTTCTACTACTCAATACTCACTCGTACTGACCTAGATGATAAAGAGGTTTACCAAGAACTCATTAACATCGAGGATAGCGCGAGGAGTAAAAGTACACAAAGCACAGTAGAGAAGAAAAGTCTCTTGGAGAGAGAGCAGCTTGCAATGCTGGGAGAAGAGCATTCAATTAAGTTGCTGGTACGTAGATGGGAATTCTGGTTGTACTACATAGCATATTTTTGTGGAGGAACAATTGGTTTGGCTTACAGCAACAACTTGGGCCAAATTTCCCAATCACTAGGACACTATTCCCACACTTCTTCTCTTGTCACACTCTACTCCACATGTTCCTTCTTTGGTCGCCTTCTTGCAGCCGCACCAGACTTCTTAATCAGGAGAATGCACTTTGCAAGAACAGGGTGGTTTGCAGCAGCCTTGGTGCCAACACCAATTGCATTCATTTTGTTGGTCATATCTGGTAGTGGAGCAGCATTGCACGTAGGCACTGCCTTGATAGGGTTGAGTTCAGGCTTTGTGTTTTCTGCAGCAGTGTCTATTACCTCAGAGCTATTTGGTCCAAACAACGTTGGAGTGAACCACAACATCCTCATCACCAACATTCCTTTAGGTTCATGTCTCTATGGCCTTCTTGCAGCTTTGGTTTATGATTCCAATGCAATTAACTCAACCCATGAAATTTGGCTGCAAGAGATGTCCATGTGCATTGGGAGAAAGTGCTACCTGCAAACATTCATTTGGTGGAGTTGCATTTCAATGCTGGGCTTGGTTTCAAGTTTCTGGTTCTTCTTAAGGACTAAACAAGCTTATGACAATTTTGAAAAGAATGATAACAGAAACAACATAGCTACGGGATAA 1683 0.432 MNGKYTMVGESRKWVILGASIWLQAFTGTNFDFSSYSSNLKSVLEITQLQLNYLSVASDMGKAFGWCSGLSLLHFPFWVVLFIAAFMGLFGYGFQWLLIHRFITLPYSLVFFLCLIAGCSISWFNTICYVLCIRHFPTNRSLALSLSVSFNGVSAALYTLIANAINSNDDTLYLLLNAILPVLISLLVLIPILHQPKPQPHSIDTIKHDSSIFLCLNILALVTGLYLIFLYSFSYTLATARVILVGALFLLVLLIFVPSLVYSMKSSGFSLSTSFSFYYSILTRTDLDDKEVYQELINIEDSARSKSTQSTVEKKSLLEREQLAMLGEEHSIKLLVRRWEFWLYYIAYFCGGTIGLAYSNNLGQISQSLGHYSHTSSLVTLYSTCSFFGRLLAAAPDFLIRRMHFARTGWFAAALVPTPIAFILLVISGSGAALHVGTALIGLSSGFVFSAAVSITSELFGPNNVGVNHNILITNIPLGSCLYGLLAALVYDSNAINSTHEIWLQEMSMCIGRKCYLQTFIWWSCISMLGLVSSFWFFLRTKQAYDNFEKNDNRNNIATG 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01581 560 Pfam Nodulin-like 13 259 IPR010658 -
Vimu9g01581 560 SUPERFAMILY MFS general substrate transporter 12 200 IPR036259 -
Vimu9g01581 560 Pfam PUCC protein 372 467 IPR004896 -
Vimu9g01581 560 SUPERFAMILY MFS general substrate transporter 219 543 IPR036259 -
Vimu9g01581 560 Gene3D MFS general substrate transporter like domains 299 534 IPR036259 -
Vimu9g01581 560 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01581 Vimu-Chr9 25125542 25135942 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01581 6 552 Nodulin-like Gene Family AT1G31470 54.348 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01581 - - gmx:100804951 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g01581 9 25125542 25135942 Vimu9g01581 9 25125542 25135942 ECH