Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01454 ATGATTCAAGTTATAAAAAATAAATCCACAGAAGTTTGTATAATAGGGATATGTGGAGAGGAAGGATCTGGTAAAACCACCCTTGCCAAAGCCGTCTACCATCAAGTTCATAGTACATTCACTTATAAAAGTTTTATTGAAGATATTGCAGAAGTTAGTCAAACAAGAGGGCTTGTTGGTTTACAAGAACAACTTCTTTCGGATGTCCTAAAAACAAAGATAAAGTTACACAGCGTTCAGATGGGAATCAGTATGATTCGGGAAAGACTTTCTGGGAAGAGAATGCTCATTGTACTTGATGGAACAAATGAGTATGATCCAATCGGCCTATGGAATAGTCATGTATGGTTCGGTAAAGGAACTGTAATGATAATTACAACAAGAGAAGAAGGCCTTCTAAGGATACCTGAAGTTGATTCGGTTTTGTTGATAGAGTTATTGAACACGAACGAGTCCCTTGAGCTTCTTAGTTGGCATGCATTTAGAGAAGCAAAACCAAGAGAAGAATACAATGACCTTGCAAAAAGAGTAGTTGCTTGTTGTGGAGGACTACCTCTAACTCTTGAAGTCATTGGAAGTAGTTTATTTGAAAGGCCAAAAGAAGAATGGAAGAGTATACTGTTAGAATTAGAGAAAATTCCCAAGCATGATGTTTATCAGAAATTGAAAATAAGCTTCCAAGTTTTACGAAATGAAATGGAAAAAAATTTATTCCTTGATGTATGTTATTTCTTTGTTGGTAAAGGCAGAACCTATGTTACACAGATCCTAAATGGATGTGGAGTAGATGCTGATAGTGGAATAAGAATTCTCATAGAGCGTAGCCTTATACAAGTTAAAAGGAACAACAAATTAGGAATACAACCGTTGCTACAAAAAATGGGAAAAGAAATTGTTGTTGAAATTCTAGAAAGGAGACTTCGGAACAACACTCAACTACGGTTTCGTCTGGATGAAAATTATGTAGTGTCAGATAATACTGTAAGAACATTCTTTCTCTTTGGTTTTGAAACTTCTTTTGGAAGTGTTTGCTTTCTCATGTGCAATATATTTGTTTTTCTTAGCTCTTTTCATCACAGCAGACAAAAGTCATTCAGATATTGCCTAGTAAACTCTTTTTAA 1122 0.3512 MIQVIKNKSTEVCIIGICGEEGSGKTTLAKAVYHQVHSTFTYKSFIEDIAEVSQTRGLVGLQEQLLSDVLKTKIKLHSVQMGISMIRERLSGKRMLIVLDGTNEYDPIGLWNSHVWFGKGTVMIITTREEGLLRIPEVDSVLLIELLNTNESLELLSWHAFREAKPREEYNDLAKRVVACCGGLPLTLEVIGSSLFERPKEEWKSILLELEKIPKHDVYQKLKISFQVLRNEMEKNLFLDVCYFFVGKGRTYVTQILNGCGVDADSGIRILIERSLIQVKRNNKLGIQPLLQKMGKEIVVEILERRLRNNTQLRFRLDENYVVSDNTVRTFFLFGFETSFGSVCFLMCNIFVFLSSFHHSRQKSFRYCLVNSF 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01454 373 Gene3D - 146 230 IPR042197 -
Vimu9g01454 373 Gene3D - 1 139 IPR027417 -
Vimu9g01454 373 SUPERFAMILY "Winged helix" DNA-binding domain 218 301 IPR036390 -
Vimu9g01454 373 PRINTS Disease resistance protein signature 89 103 - -
Vimu9g01454 373 PRINTS Disease resistance protein signature 181 195 - -
Vimu9g01454 373 PRINTS Disease resistance protein signature 14 29 - -
Vimu9g01454 373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 240 IPR027417 -
Vimu9g01454 373 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 317 IPR044974 GO:0006952
Vimu9g01454 373 Pfam NB-ARC domain 6 216 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01454 Vimu-Chr9 23303713 23316727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01454 3 317 WRKY Transcription Factor Family AT5G45050 31.562 3.99e-41 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01454 - - vra:106773334 599.742