Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01451 ATGGCATTAGCTGTGGTAGGCGGTGCGCTCCTTTCTGCTTTCATTGACGTTCTTTTCGACAGGCTAGCCTCCCCTGAGGTTGTCAACTTTATCCGAGGAAAGAAACCTGACAAGTTGCTTCAAAAGGTGAAAACCCAGCTCATAGTTGTTAGAGTTGTGCTTGCGGATGCCGAGAATAGACAAATCACAGACCCCAATGTCAAAGAGTGGCTCGATCTTATCAGAGATGTTGTCTATGAGGTGGATGATTTACTTGATGAAGTTTCTACTAAAGCTGCAACTCAAAAGGAGGTAAGCAATGCATTTTCTCGCCTTTTCAAAATGAAGAAGATGGTTAACATTAGTAAGTTGGAAGACATAGTTGAAAGATTAGATGACATTCTAAAACAAAAAGAAAGTCTTGATTTGAAGGAGATTCCAGTGGAGAGCTACAGGCCATGGAAAGCTCAGCCAACATCTTTGGATGATGGATATGCTATCTACGGTAGAGATAAAGATAAAGAGGCCATAATGAAATTGTTGTTAGAGGAGAACACCAATGGTGAAAAAGTGTCTATGATCCCTATTGTAGGCATGGGTGGGGTTGGAAAAACCACTTTGGCAAGATCTGTGTTCAACGATGACAAATTGAAGCAGCAGACCTTTGATTTAAAGGCATGGGTTTGTGTTTCTGATATATTTGATATTGTGAAGGTCACAAGAAGCATGATAGAGGAAATTACCCGAAAGGCTTGTAAATTGAGTGATCTAAATGCTCTTCAACTTGAGTTGATGGACAAACTGAAAGGTAAAAGATTATTGATTGTCTTGGATGATGTTTGGATCGAGGATTGTGACAATTGGAGGAGTCTTACAAAACCATTTCTAAGCGGGATTAGGGGCAGTAAAGTTTTGATCACAACCCGCAATGAAAATGTAGCTGTTGCTGTGCCTTTTCATAATGTTGAAGCATATCATCTAAGCAAATTGTCAAATGAAGATTGTTGGTTGGTGTTTGCAAACCATGCATTTCCTCTCTCTGAAGCCAGTGAGACTAGAGGAACTCTAGAAAAGATTGGAAAGGAGATTGTTAGAAAGTGCAATGGGTTGCCGTTAGCGGCACAGTCACTTGGAGGAATGTTGAGAAGAAAGCAGACTATTAAGGATTGGAATAATGTACTTCAAAGTGACATTTGGGAACTTCCTGGAGGTCAGTGTGAAATTATTCCAGCACTTAGAATAAGTTATAATTATCTCCCTCCACATTTAAAACAGTGTTTTGTTTATTGCTCACTTTACCCCAAAGATTATGAATTTTTAGAAGATGAACTCATCCAGCTGTGGATGGCAGAAGATATCGTAAAACCACCAAAAAATGGAAAGACTTTAGAAGAAGTTGGTCACGAGTATTTTGATGATTTGGTTTCGAGATCCTTTTTTCAACGTACAAATGGTAACACTTTTGTCATGCATGATCTAGCAGCATTCCTTGGAGGGGAATTCTATTTTAGAGCAGATGAACTTGGAAAAAAAACCAAAATCAATAGAAAAACTCGTCATTTGTCATTTACCAGATTCAGTGATCCAGTATCGGATATTGAAGTTTTTGACACAGTAAAATTTCCAAGAACTTTCTTGCTAATCAAATTTAAAGAATCCCCATTCAACAACGAAACGGCACCGCGTATTATAGTGTCAAGGCTTAAGTACTTGAGAGCTTTATCGCTTTGCAACTTCCAAAGTCAACTTGCTCTGCCTGATTCAGTTGGTGAATTGATACATTTGCGTTATCTAAATCTCTCTAGTACAAGTGTAGAAACTCTGCCGGAGTCACTGAGTAATTTGTGCAATCTACAAACGTTGAAGCTGTCTTTTTGTTTAAAGCTGACTAAGTTGCCTAGTGCCATGCAAAATCTTGTAAACTTGCGTCATCTTGAAATTCATGCTACTTCCATAAAAGAGATGCCTAAAAGAATGGGAAAACTAAATCAATTACAGAATTTGGAGTTTTATATTGTGGGCAAGCATATAGAGAATAGCATCAAAGAACTGGGAGGACTTTCAAATCTTCGTGGTTCGTTTTCTATTAAGGCACTGGAGAACGTTACTAAAGGCGAAGAAGCATTAGAGGCCAGGATAATGGATAAGAGTTATATTAACCATCTATCCTTGGAATGGTCTATAGCTAACGACAGTAGCATCGACTTCCAATATCAGTTAGATGTACTCAGCAGGTTAGAACCTCACCAAGACCTGGAGTCGTTATCAATAAATGGTTACAAAGGAACCAGATTTCCGGAATGGGTGGGGAGTTTTTCCTACCGCTACATGACATTTATAGGTTTATCTAATTGTAAGAACTGTTGCATACTTCCTTCACTTGGGCAGCTACCATCCCTCAAGCACCTCTCTATTTCAGACATGAACTCCGTGAAGACAATCGACGCAGGGTTTTATAGGAAGGTAGATGGTTCATCTGTGATACCTTTTGCCTCCCTTGAATCTCTACACATTTCTAGTATGCCTTGTTGGGAGGTGTGGAATGCTATTGATTCAGAAGCTTTTCCTGTGCTTCAGAATCTTTGTATTGTAGACTGCCAGAACCTTAGGGGAGATTTGCCAAAACATCTACCTGCCCTGAAAACTCTCACGATTATAAATTGCGAGTTTCTTGTCTCTTCTGTCCCAATGGCTCCCACTCTTCGAACATTAGACATACGTAACAGCAACAAAGTAGAGTTTCATGAGTTTCCTCTTTTGGTCGAAAGTATAAATGTAGAAGGAGGTCCAGTGGTGGAGTCCATTATGAAGGCCTTCACTATCATCCAACCTACTTGCCTCCATTTTTTATTCCTAAAGAATTGTTCGTCAGACATATCTTTTCCAGGTGATCGTCTTGCAGCATCGCTGAAAAGTCTTCATATCAGTGGTTTAACCAAAATCAAATTTTCGATGCAACACAAACACGAATTACTGGAATCACTTTCAATAATTAATTGTGATTCGCTCACGTCTCTTCCATTGGCTATCTTCCCAAATCTCCTTAGTCTTCAAATAAAAAACTGCGAAAATATGGAATCACTTTTGGCCTCAGGGTCAGAGTTGTCGAAGAGTCTGAACTATGTTGAGATTAGCCACTGTCCCAACTTTGTATCATTCCTGGGAGAAGGATTATGTATGCCCAATTTGACTCGTTTCTGTGTTTATAATTGTGACAAGTTGAAGTCGTTGCCCGATCAGATGGGAACTTTTCTCCCAAAGATAGAATTTCTTAACATATCCAACTGCCATCAAATTGAGTCATTCCCTGGAGGAGGTATGCCACCTAACTTGAGAACAGTTGAGATCAGGAATTGTGAGAAACTATTGAGAGGCCTAGGATGGAAATCGATGGACATGGTTACCTCTCTCAGGGTGTATGGTCCATCTGATGGCATCAAATCCTTCCCAAAGGAGAGTATGCTGCCTCCCTCCCTTGTGTCTCTGGATTTAATTGATTTGTCTAGTCTGGAAACGTTGGATTGCAAGGGGCTTCTCCATCTCACATCACTCCAAGAATTAAACATTAAAAGGTGTCAAAAGCTGGAAAACATTGGGGGAGAAAAGCTGCCTCTCTCTCTAACAAAATTAATGATATATGAATGTCCCTTGCTGAAACAACGATGCCACAAAAAGGACCGTCAAATTTGGCCTAAAATCTGTCATGTCCGTGGGATAAAGATTGATGACAAGCTAGATTGGTTTGGAGAAACTGCACCTGTCCATTTGAATGTAGTGCCCTCTAGGAGTTTTCATTGTTTTGGAGATGCAAAACCAAAAGAAGACTTCAGTGAGGTTTCAAGAAACGTTGTTGCTTATTGTGGAGGACTACCTCTGGCTCTTGAAGTGCTTGGTTCTTATTTATTTGACAAGACGTCAAAGAGAGTGTGGGAAGGAGTATTGTCGATATTAGAAAAAAATCCCAATGGTGAGGTTCAGCAGAAATTAAGAATAAGCTTTGATAGTTTAAGCAATGAGACGGAGAAGGATATATTTCTTGATGTATGTTGTTTCTTTATAGGTAAAGACAGAGCTTATGTCACAGAAATACTAAATGCTTGTGAACTATGTGCTGATGTTGGAATACCGGTTCTCATAGAACGTAGCCTCATAAAAGTAGACAAAAACAACAAACTTGGAATGCATCCTTTGCTACAAGAAATGGGAAGAGAGATAATTCGTGAAAACTCAAGAAAGGACCCTGGGAAGCACAGTCGATTGTGGTTTGAAAAGGAAGTAGTTGAAGTATTGACAAAGAATACTGGGACAAAAGCTATTGAGGGATTGGTTTTGAAAATGCATTTAACCAGCCGAGATTGCTTCAAAGCCGATTCTTTCCTGAAAATGGAGAGATTGAGACTGTTGCAACTCCATCATGTACAACTTGCTGGAAATTATGGATACCTTTCTAAGCAACTGAGATGGATCTCTTGGCACGGCTTTCGTTCAAATTATCTGCCAAACAGCTTTTGTATGGATGATGTAATTGCGATTGATTTAAAGTACAGTCATCTTCGATTCGTCTGGAAACAATCCCAGGACTTGAAGTGGCTAAAAGTCCTTAATCTCAGTCACTCCAGGTACTTGATAGAAACCCCTGACTTTTCTAGACTACCAAGTCTTGAGCAGCTCATTCTCAAAGATTGTCCAAGTTTATTAGAGATACACAAATCCATTGGTGATCTCTGTAATATTTTATTGATAAATTTGAAGGATTGTACAAGCCTAAGCAATCTCCCCAAAGAGATATATAAGTTGAAATCTGTGAAAACATTCATCCCTTCTGGTTGTTCAAAGTTCGACAAATTGGAAGAAGATATAGCACAGATGGAATCCTTGACAACTCTAATTGGTGATAATACTGCTGTGAAACAGGTCCCCGTTTCAGTAGTAAGGTCGAAAAGCATTGGATATATATCTCTATGCGGATTTGAAGGACTGGCACGAAATGTTTTTCCTTCTATAATCCAATCTTGGATGTCACCAGCAATGAATCCCTTGTTATCTATTCGTCCGTTTTTTGGCACATCGTGTTCTCTGGTTTCCATGAATACACAGGATAATACTTTGGTTGAACTTGCACCCATGCTTAGAAGCCTTCCACATCTTCGAAGTCTTTTGCTGCGATATGAGACAGAGTCTCAACTATCTAAAGATGTAGAAACCTTTTTGGTTGAACATGTTGTAAATGTTGCAGAATTAAGAATTTCAAGGCATCACTTGAGGTCATCTTTGATTGGAGTTGGAAGTTACAAAGCATTCTTTGATATTCTCAACGATACAATATCTAAGGGATTGGTAACCAATGAGGCTTGTGAAGTTTTACTTCCAATTGACAATTATCCTTATTGGTTGGCCCATATAGGTGAGGGACAGTCAGTGTTTTTCACTGTGCCGGAGGACTGTGGCATGAAGGGAATGACTTTGTGTATTGTTTATTTATCAAAGACCGAAATCAAGCCCACCGAATGTCTTACTAGTAGTGTCTTAATTGCTAATTACACAAAGCGCACCCTGCAGATACACAGGCAAGAAACAGTGACTTCCTTTAATGATGAAGATTGGCAGGAGATAATATCACATTTGGCAGGTGGAGACAAGGTGGAGATTTTTGTAACTTTTGGTCATCACTTGGTAGTCAAGAAAACGGCTGTGTATCTAATGTACGGTGAATCGAACAATATAGAAATTGAGCCGACAAATTGTGAATCGAATGATGTAGAAATTGAGCTGCTGCATTGTGAATCAAATAATATCGAAATTAAGGCAATATGTGAACCAAATGATATTGAAAGTAAGCCCCTGCATTGTGAAGCAAATGATATCAAAATTACGGCCATGAATTCTTATAGGAAAAGAAAATGCCCTGATTTCGAGGATAAGGAACCTCCTAGAAACAACAGAGAAAGAGGGCTCCTACCATCAATACCCACCACTATGGAAGGCTCCTTGTCCTCAAGTGAAAATCAAAAACTAGCTCGGTCCAAATTTCCCATGTGGTGTCTTCAGGAGCAGGACCTTTCCATTGGACCAGTGCAAGCTTCGGAGATCAAGTTTATATGCAACAAGGCCTATACGAGCTGTGATGCGAAAAGGACGATAAAAGCGCTTGGCCAGTTTAGGACAAGAAGGGGAATAGAGTGA 6162 0.3955 MALAVVGGALLSAFIDVLFDRLASPEVVNFIRGKKPDKLLQKVKTQLIVVRVVLADAENRQITDPNVKEWLDLIRDVVYEVDDLLDEVSTKAATQKEVSNAFSRLFKMKKMVNISKLEDIVERLDDILKQKESLDLKEIPVESYRPWKAQPTSLDDGYAIYGRDKDKEAIMKLLLEENTNGEKVSMIPIVGMGGVGKTTLARSVFNDDKLKQQTFDLKAWVCVSDIFDIVKVTRSMIEEITRKACKLSDLNALQLELMDKLKGKRLLIVLDDVWIEDCDNWRSLTKPFLSGIRGSKVLITTRNENVAVAVPFHNVEAYHLSKLSNEDCWLVFANHAFPLSEASETRGTLEKIGKEIVRKCNGLPLAAQSLGGMLRRKQTIKDWNNVLQSDIWELPGGQCEIIPALRISYNYLPPHLKQCFVYCSLYPKDYEFLEDELIQLWMAEDIVKPPKNGKTLEEVGHEYFDDLVSRSFFQRTNGNTFVMHDLAAFLGGEFYFRADELGKKTKINRKTRHLSFTRFSDPVSDIEVFDTVKFPRTFLLIKFKESPFNNETAPRIIVSRLKYLRALSLCNFQSQLALPDSVGELIHLRYLNLSSTSVETLPESLSNLCNLQTLKLSFCLKLTKLPSAMQNLVNLRHLEIHATSIKEMPKRMGKLNQLQNLEFYIVGKHIENSIKELGGLSNLRGSFSIKALENVTKGEEALEARIMDKSYINHLSLEWSIANDSSIDFQYQLDVLSRLEPHQDLESLSINGYKGTRFPEWVGSFSYRYMTFIGLSNCKNCCILPSLGQLPSLKHLSISDMNSVKTIDAGFYRKVDGSSVIPFASLESLHISSMPCWEVWNAIDSEAFPVLQNLCIVDCQNLRGDLPKHLPALKTLTIINCEFLVSSVPMAPTLRTLDIRNSNKVEFHEFPLLVESINVEGGPVVESIMKAFTIIQPTCLHFLFLKNCSSDISFPGDRLAASLKSLHISGLTKIKFSMQHKHELLESLSIINCDSLTSLPLAIFPNLLSLQIKNCENMESLLASGSELSKSLNYVEISHCPNFVSFLGEGLCMPNLTRFCVYNCDKLKSLPDQMGTFLPKIEFLNISNCHQIESFPGGGMPPNLRTVEIRNCEKLLRGLGWKSMDMVTSLRVYGPSDGIKSFPKESMLPPSLVSLDLIDLSSLETLDCKGLLHLTSLQELNIKRCQKLENIGGEKLPLSLTKLMIYECPLLKQRCHKKDRQIWPKICHVRGIKIDDKLDWFGETAPVHLNVVPSRSFHCFGDAKPKEDFSEVSRNVVAYCGGLPLALEVLGSYLFDKTSKRVWEGVLSILEKNPNGEVQQKLRISFDSLSNETEKDIFLDVCCFFIGKDRAYVTEILNACELCADVGIPVLIERSLIKVDKNNKLGMHPLLQEMGREIIRENSRKDPGKHSRLWFEKEVVEVLTKNTGTKAIEGLVLKMHLTSRDCFKADSFLKMERLRLLQLHHVQLAGNYGYLSKQLRWISWHGFRSNYLPNSFCMDDVIAIDLKYSHLRFVWKQSQDLKWLKVLNLSHSRYLIETPDFSRLPSLEQLILKDCPSLLEIHKSIGDLCNILLINLKDCTSLSNLPKEIYKLKSVKTFIPSGCSKFDKLEEDIAQMESLTTLIGDNTAVKQVPVSVVRSKSIGYISLCGFEGLARNVFPSIIQSWMSPAMNPLLSIRPFFGTSCSLVSMNTQDNTLVELAPMLRSLPHLRSLLLRYETESQLSKDVETFLVEHVVNVAELRISRHHLRSSLIGVGSYKAFFDILNDTISKGLVTNEACEVLLPIDNYPYWLAHIGEGQSVFFTVPEDCGMKGMTLCIVYLSKTEIKPTECLTSSVLIANYTKRTLQIHRQETVTSFNDEDWQEIISHLAGGDKVEIFVTFGHHLVVKKTAVYLMYGESNNIEIEPTNCESNDVEIELLHCESNNIEIKAICEPNDIESKPLHCEANDIKITAMNSYRKRKCPDFEDKEPPRNNRERGLLPSIPTTMEGSLSSSENQKLARSKFPMWCLQEQDLSIGPVQASEIKFICNKAYTSCDAKRTIKALGQFRTRRGIE 2053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01451 2053 Gene3D Ribonuclease Inhibitor 1447 1763 IPR032675 -
Vimu9g01451 2053 Coils Coil 114 137 - -
Vimu9g01451 2053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1257 1340 IPR027417 -
Vimu9g01451 2053 SUPERFAMILY L domain-like 1387 1717 - -
Vimu9g01451 2053 Gene3D - 322 407 IPR042197 -
Vimu9g01451 2053 Gene3D - 1255 1330 IPR042197 -
Vimu9g01451 2053 Gene3D - 15 121 - -
Vimu9g01451 2053 FunFam Probable disease resistance protein At1g61300 144 314 - -
Vimu9g01451 2053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 423 IPR027417 -
Vimu9g01451 2053 Pfam Rx N-terminal domain 11 101 IPR041118 -
Vimu9g01451 2053 Gene3D - 408 491 IPR036388 -
Vimu9g01451 2053 Gene3D Ribonuclease Inhibitor 960 1095 IPR032675 -
Vimu9g01451 2053 SUPERFAMILY L domain-like 893 1226 - -
Vimu9g01451 2053 Gene3D Ribonuclease Inhibitor 1096 1228 IPR032675 -
Vimu9g01451 2053 PRINTS Disease resistance protein signature 360 374 - -
Vimu9g01451 2053 PRINTS Disease resistance protein signature 606 622 - -
Vimu9g01451 2053 PRINTS Disease resistance protein signature 260 274 - -
Vimu9g01451 2053 PRINTS Disease resistance protein signature 186 201 - -
Vimu9g01451 2053 MobiDBLite consensus disorder prediction 1961 1994 - -
Vimu9g01451 2053 CDD RX-CC_like 28 127 IPR038005 -
Vimu9g01451 2053 SUPERFAMILY L domain-like 536 900 - -
Vimu9g01451 2053 PANTHER DISEASE RESISTANCE PROTEIN RP 1271 1741 IPR044974 GO:0006952
Vimu9g01451 2053 Pfam NB-ARC domain 164 388 IPR002182 GO:0043531
Vimu9g01451 2053 Gene3D Ribonuclease Inhibitor 530 915 IPR032675 -
Vimu9g01451 2053 Gene3D - 148 313 IPR027417 -
Vimu9g01451 2053 SUPERFAMILY "Winged helix" DNA-binding domain 1317 1423 IPR036390 -
Vimu9g01451 2053 FunFam Probable disease resistance protein At1g63360 409 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01451 Vimu-Chr9 23250960 23259521 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01451 184 378 WRKY Transcription Factor Family AT5G45050 27.228 2.60e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01451 - - vun:114165446 1813.89