Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01447 ATGTCTACAGGTATTATTATTATTATTAATATTATTAATATTATTATTATCATCAAAGAAGTGAGGTTATCAATTCCTTCCATGGAACTTGCCTCATCGGTTTCCAAACTCCCACGGATGTACGACGTTCTCATCAACTTCACCGGAGAAGACATCCGCAGGAAATTTGTTTCTCATCTCGATTCTGTCCTCTCTTCTGTTGGACTAACTACTTTCCTTCAGCACGACAATGCAGTGCAGCCAAAACACATCCAAGAGCCTATTCTGAATCTGTGTCGAGTAGCAATTGTTGTTTTCACCGAAACCTATTCTCAATCTGCTTGCTGTCTTCATCAGCTCCAACAAATCATTGAATGGCACGAAACTTATGGCCGACATGTTTTGCCCGTATATTACGAAATTCAGCCATCCGATGTACGTCTTCAGAAGGGTGACTTTGGAAAAGCATTCAGAGAAACTGCACACCAAACATTTTCAGCACAAGAACTGGAGCATGGCATGTCCAGGTGGAGTCACGCAATCACCAAAGCTGCAAATTTCTTTGGATGGGATGATTGCAATTACAGGAGTGATGCTGAACTAGTGGACACAATTGTTAAGAGCGTTCTTAATTTACCAGTGTTGTCTGCTACAAAATTTCCAGTTGAATTACATTCTCTCGCGGAAGAAGTGATTCAAATTATAAAAAATAAATCATTGGGACTTTGTAGGATAGGGATATGTGGAATGGGAGGGTCGGGTAAAACCACCCTTGCCAAAGCCATCTATAGTCAAATTTATGTTACATTCACGGAGAAAAGTTTCATTGAAGATATTTCAGAAGTTAGTCGGAGGAGAGGGCCTGTACATTTACAACGACAGCTTCTTTCAGATGTGCTGAAAACAAACATAGAGATACATAACGTTGAAATGGGAAAAAGTTTGATTCTGGAAAGACTTTATCGGAAAAGGGTGCTCATTGTACTTGACGATGTGAATGAACATTGTCCATTAGACCTATGGGAAAGTAGGGGATGGTTCGGTGAAGGATCTGTAATAATCATTACAACAAGAGATGAAGACCTGCTAAGGAAACATGAAGTTCGTTCAGTTTTTCGGATAGATCTAATGAATGAGAACCAGTCCCTTGAACTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAGCAGAATACATCGACCTTGCAAAAAGAGTAGTTGCTACCTGTGGAGGACTACCGCTAGCTCTTGAAGTCATTGGAAGTAGTTTATTTGAAAGGACGAAAGAAGAATGGAAGAGTGTAGTGTCAAAATTAGAGAATATTCCCCCAAATGAAGTTGTACAAAAATTGAAAATAAGCTTCGACGGTTTGCATAATCAAATGGAAAAAGATTTATTCCTTGATGTATGCTGTTTCTTTGTTGGTAAAGGCAAAGCTTATGTTAGGGAGATCCTAAATGGCTGTGGAGTAGACGCTGATAGAGGAATAAGAGTCCTCATAGAGAGTAACCTCATTAAAGTTAAAAAGAAAAACAGACTTGGAGTGCATCCTCTGCTACGAAAAATTGGAATAGAAGTTATTCTTGAAATTTCAAGAAAGGAACCTCGAAATAAGAATCGGCTGTGGCTTGATAAGGACATGCATCATGCACTATTAGAGAATACTGAGAACAAAATCATTCACAGATGTCCTATGGAAAGGGATTTATTTGAACGTTATCCTCCTTTAGAGATAAGTGGCCCATTAACATTGGTGAAAATCACTAGAGATTCTGAGCTCCCTCCTAAGAAACTGAAATGGACCAGTAGGCAAGGGTTTCCTACAGAATACCTACCTAAAGAACTTTATCTGCATGATGCAATAGTGATTGATTTAAAATACAGTCTTCTTCGATTCTTGTGGAAGGAACCTCAGCTCATTCTCAAAGATTGCCCAAGATTGCGCCAAGTACACCAATCTATTGGATGCCTCTGCAATCTTACACTTCTAAATGTGAAGGATTGTACAAGTCTAGACAATCTCCCAGAAGAAATATATAGGTTGAAATCTTTAAAAACTCTCATTCTCTCTGGCTGTTCAAAGATAAGCCTGATTGAAAAAGATGTAGGGCAAATGGAATCCTTGATAACTCTAATTGCTGAAAATACAGCTGTGAAACAAGTGCCTTTTTCCATTTGTTGGATGTCGCAAACATTGAATCCACTATCTTATATTCATTCCTTTTGCATGGATAAGGAGCATAATAGTGGGGATGACATTATTCCACTATTTAACACCCTTGCAAATCTTCGAAGTGTTTTGGTGCAATGTGACACCGAGTTTCCACTATCTAAGCAAGTAAGAACTACTTTGGTGGAATATGTTGTAAATATTTCAGAATCAGGAATTCCAAAGCATCACTTCAGGTTATATTTGATTGGCTTTGGAAGACACACAGAATTCTTCAATACTGTGAGCGATAGCGTATCTCAGGTATTCACAAGCAGTGAGTTAAGTGATATTTCTCTCCCTGGCGACAATGATCCTTATTGGTTAGCCCATATGGGTGAGGGACATTCTGTTTCTTTCACTTTGCCTCAGGATCGTGTCATGAAGGGAATGGCTTTGTGTGTTTTTTATTTACCAACCTCCAAAATCATTAAACCTAAAGTTACTACTGTCTTAATTGTTAATTACACGAAGTGCACATTACAAATGCACAACCATAGCTCGGGAGTTTCCTTTAACGATGAAAATTGGCATTTCATAATGTCAAATTTAGAATCTGGAGACAAGGTGGAGATTTTTGTGACTTTTGGTCATGGATTACTGATCAAGAACACAGCTGTCTATCTTATATATGGTGAATCAAATGACTTGGAAATGGAGCCTTGTCCTGAGCCAAAGAAAAATTCTTTAAATAAATTCATTAATAAAATGTTAATGTTCTTTTTTGAGAACAGAAAAGGAGCTGGAGCCAAAGAAAAATTCCCAAGGATCTCTGGTAATGAGACTTCTGGTAAGTCATTCATCTTCTTTGAGAACAGCAGGACCTCTTGA 3024 0.3826 MSTGIIIIINIINIIIIIKEVRLSIPSMELASSVSKLPRMYDVLINFTGEDIRRKFVSHLDSVLSSVGLTTFLQHDNAVQPKHIQEPILNLCRVAIVVFTETYSQSACCLHQLQQIIEWHETYGRHVLPVYYEIQPSDVRLQKGDFGKAFRETAHQTFSAQELEHGMSRWSHAITKAANFFGWDDCNYRSDAELVDTIVKSVLNLPVLSATKFPVELHSLAEEVIQIIKNKSLGLCRIGICGMGGSGKTTLAKAIYSQIYVTFTEKSFIEDISEVSRRRGPVHLQRQLLSDVLKTNIEIHNVEMGKSLILERLYRKRVLIVLDDVNEHCPLDLWESRGWFGEGSVIIITTRDEDLLRKHEVRSVFRIDLMNENQSLELLSWHAFREAKPKAEYIDLAKRVVATCGGLPLALEVIGSSLFERTKEEWKSVVSKLENIPPNEVVQKLKISFDGLHNQMEKDLFLDVCCFFVGKGKAYVREILNGCGVDADRGIRVLIESNLIKVKKKNRLGVHPLLRKIGIEVILEISRKEPRNKNRLWLDKDMHHALLENTENKIIHRCPMERDLFERYPPLEISGPLTLVKITRDSELPPKKLKWTSRQGFPTEYLPKELYLHDAIVIDLKYSLLRFLWKEPQLILKDCPRLRQVHQSIGCLCNLTLLNVKDCTSLDNLPEEIYRLKSLKTLILSGCSKISLIEKDVGQMESLITLIAENTAVKQVPFSICWMSQTLNPLSYIHSFCMDKEHNSGDDIIPLFNTLANLRSVLVQCDTEFPLSKQVRTTLVEYVVNISESGIPKHHFRLYLIGFGRHTEFFNTVSDSVSQVFTSSELSDISLPGDNDPYWLAHMGEGHSVSFTLPQDRVMKGMALCVFYLPTSKIIKPKVTTVLIVNYTKCTLQMHNHSSGVSFNDENWHFIMSNLESGDKVEIFVTFGHGLLIKNTAVYLIYGESNDLEMEPCPEPKKNSLNKFINKMLMFFFENRKGAGAKEKFPRISGNETSGKSFIFFENSRTS 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01447 1007 PRINTS Disease resistance protein signature 237 252 - -
Vimu9g01447 1007 PRINTS Disease resistance protein signature 404 418 - -
Vimu9g01447 1007 PRINTS Disease resistance protein signature 312 326 - -
Vimu9g01447 1007 PRINTS Disease resistance protein signature 674 690 - -
Vimu9g01447 1007 SUPERFAMILY Toll/Interleukin receptor TIR domain 32 183 IPR035897 -
Vimu9g01447 1007 SMART AAA_5 234 375 IPR003593 GO:0016887
Vimu9g01447 1007 Pfam TIR domain 41 203 IPR000157 GO:0007165
Vimu9g01447 1007 SMART till_3 40 180 IPR000157 GO:0007165
Vimu9g01447 1007 Pfam NB-ARC domain 222 437 IPR002182 GO:0043531
Vimu9g01447 1007 Gene3D - 34 202 IPR035897 -
Vimu9g01447 1007 ProSiteProfiles TIR domain profile. 39 206 IPR000157 GO:0007165
Vimu9g01447 1007 SUPERFAMILY "Winged helix" DNA-binding domain 440 546 IPR036390 -
Vimu9g01447 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 463 IPR027417 -
Vimu9g01447 1007 SUPERFAMILY L domain-like 608 760 - -
Vimu9g01447 1007 Gene3D - 203 364 IPR027417 -
Vimu9g01447 1007 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 41 760 IPR044974 GO:0006952
Vimu9g01447 1007 Gene3D - 369 453 IPR042197 -
Vimu9g01447 1007 Gene3D Ribonuclease Inhibitor 618 716 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01447 Vimu-Chr9 23110948 23116750 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01447 41 720 WRKY Transcription Factor Family AT4G12020 25.572 2.51e-50 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01447 - - vun:114165123 1209.51