Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01446 ATGGCCTTCACAACTTCGCCATCGTTCTCGAAATCGAAACACCAACGGATTCACGACGTGTTCATCAACTTCAGGGGAGAAGACACCCGCAGGAAGTTCGTTTCTCATCTCCACTATGCTCTCTCAAACGCTGGAGTCAACACCTTCTTTGACGAGGAGAATCTTGTCAAAGGAATGCAGCTTCAAGAACTCATGCGAGCAGTAGAAGGATCTCAGATAGCGATCGTTGTTTTCTCCCAATCCTACACTGAATCAACTTGGTGCCTTGATGAGCTTGAACAAATCATCAAATGCAACCAAACTCAGGGCCAGAGTGTTCTCCCTGTGTTTTACGAGATTGACCCATCCGATGTTCGTCATCAGAAAGGTGATTTTGGAAAATCGTTGGAAGAAGCTGCACGCAGAACCTATTCAGGAGAACAACTGGAGCGTGCCTTGTCCCGGTGGAGCCGTGCACTCAACAAAGCTGCAGGTATCTCTGGTTGGGATGTCAGAAATTTCAGGAATGAAGCTGAATTAGTAAGACAAATTGTTGACCGCGTTCAGAAGTTACTGGACTACGAAGTCTTGTCTATTACAGAATACCCTGTTGGACTAGAATCCCGTGCGCAAGACGTGATTGGACTCATTGAAACTCGTTCCACCCAAGTCTGTATGATAGGGATTTGGGGTATGGGGGGATCGGGGAAAACTACCGTTGCAAAAGCTGTCTACAATCAGATTCATCGTAGATTCATGGATAAAAGTTTCATTGAGAATATTAGAGAAACTTGTGAAAATCATGGTAGAGGGTATATTCCTTTGCAAGAACAGCTTCTTTCAAATGTTCTGAAAACGAAGGTGGAGATACATAGCGTTGGGATGGGGACGACTATGATCGAGAACAGACTTGATGGAAAAACCGCACTCATTGTACTTGATGATGTGAATGAGTACAACCAATTAAAAGCTGTCTGTGGAAATCGTAAGTGGATTGGTCAAGGAAGTGTAATAATCATTACAACTAGAGATGTTGGCCTCCTTACTAGACTTGATGTTGATTATGTTTATGGGATGGATAAAATGGATGAAGACGAGTCGCTTCAGCTTTTCAGTTTTCATTGTTTTGGAGATGCAAAACCAAAAGAAGACTTCAGTGAGCTTTCAAGAAACGTTGTTGCTTATTGTGGAGGATTACCTCTGGCTCTTGAAGTGCTTGGTTCTTATTTATTTGACAAGACCTCAAAGAAAGTGTGGTTAGGAGTGTTGTCGATACTAGAAAAAATTCCCAATGATGAGGTTCAGCGGAAATTAAGAATAAGCTTTGATAGTTTAAGCAATGACATGGAGAAGGATATATTTCTTGATGTATGTTGTTTCTTTATAGGTAAAGACAGAGGTTATGTCACAGAAATACTAAATGGTTGTGAACTATGTGCTGATGTTGGAATACCGGTTCTCATAGAACGTAGCCTCATAAAAGTAGAAAAAAACAACAAACTTGGAATGCATCCTTTGCTACAAGAAATGGGAAGAGAGATCATTCGTGAAAACTCAAGAAAGGACCCTGGGAAGCACAGTCGATTGTGGTCTCAAAAGGAAGTAGTTGAAGTATTGACAAAGAATACTGGGACAGAAGCTATTGAGGGATTGGTTTTGAAAATGCATTTAACCAGCAGAGATTGCTTCAAAACCGACTCTTTCCAGAAAATGGAGAGATTGAGACTGTTGCAACTCCATCATGTACAACTTGATGGAAATTATGGGTACCTTTCTAAGCAACTGAAATGGATTTCTTGGCACGGCTTTCCATCAAATTGTCTGCCAAACAGCTTTTGTATGAATGATGTAATTGCGATTGATTTAAAGTACAGTCATCTTCGATTCGTCTGGAAACAATCCCAGGATTTGAAGTGGCTAAAAGTCCTTAATCTCAGTCACTCGAGGTACTTGACAGAAACCCCTGACTTTTCTAGACTACCAATTCTTGAGCAGCTCATTCTCAAAGATTGTCCAAGTTTATTAGCGATACACAAATCCATTGGTGATCTCTGCAATATTTTATTGATAAATTTGAAGGATTGTACAAGCCTAAGCAATCTCCCCAAAGAGATATATAAGTTGAAATCTGTGAAAACATTTATCCTTTCTGGTTGTTCAAAGATTGATAAATTGGAAGAAGATATAGCACAGATGGAATCCTTGACAACTCTAATTGCTGATAATACTGCTGTGAAACGGGTCCCCGTTTCAATAGTAATCTCGAAAAGCATTGGATATATATCCTTATGCGGATTTGAAGGACTGGCACGAAATGTTTTTCCTTCTATCATCCAGTCTTGGATGTCACCAACAATGAATCCCCTGTTATTTATTTGTCCGTATCCTGGCGCATCCTGTTCTCTGGTTTCCATGAATACACAGAATAATACGTTGGGTGAACTTGCACCCATGCTTAGAAGCCTTCCAAATCTTCGAAGTGTTTTGCTGCGATATGAGACAGAGTCTCAACTATCTAAACTTGTGGAAACCTTTCTGGTTGAACGTGATGTAAATGTTTCAGAATTAGGAATTTCAAGGCATCAGTTGAGGTCATCTTTGATTGGAGTTGGAAGTTACAAAGCATACTTTGATATTCTCAACGATAAAATATCTAAGGGATTGGTAACCAATGAGGCTTGTGAAGTTTCACTTCCAATTGACAATAAACCTTATTGGTTGGCCCATACAGGTGAGGGACAGTCAGTGTTTTTCACTGTGCCGGAGGACTGTGGCATGAAGGGAATGACTTTGTGTATTGTTTATTTATCAAACCCCGAAATCAAGCCCACCGAATGTCTTACTAGTGTCTTAATTGCTAATTACACAAAGCGCACCCTGCAGATACACAGGCAAGAAACAGTGACTTCCTTTAATGATGAAGATTGGCAGGAGATAATATCACATTTGGCAGGTGGAGACAAGGTGGAGATTTTTGTGACTTTTGGTCATGACTTGGTGGTCAAGAAAACGGCTGTCTATCTTATGTATGGTGAATCGAACGATATAGAAATTGAGCCGACGAATTGTGAATCGAATGATGTAGAAATTGAGCTGCCGCATTGTGAATCAAACAATATCGAAATTAAGGCAATATGTATACCAAATGATATTGAAAGTAAGCCGATGCATTGTGAAGCAAATGATATCAAAATTGCGGCCATGAATTCTGAATCAAATGTCTTGGAAATGAAGTCTGATCCTAAGCCAAACGGAAATGGCTGCATTAGATTCTTCAAGAAATTTGCAATGTGTGACTGGTAA 3282 0.4016 MAFTTSPSFSKSKHQRIHDVFINFRGEDTRRKFVSHLHYALSNAGVNTFFDEENLVKGMQLQELMRAVEGSQIAIVVFSQSYTESTWCLDELEQIIKCNQTQGQSVLPVFYEIDPSDVRHQKGDFGKSLEEAARRTYSGEQLERALSRWSRALNKAAGISGWDVRNFRNEAELVRQIVDRVQKLLDYEVLSITEYPVGLESRAQDVIGLIETRSTQVCMIGIWGMGGSGKTTVAKAVYNQIHRRFMDKSFIENIRETCENHGRGYIPLQEQLLSNVLKTKVEIHSVGMGTTMIENRLDGKTALIVLDDVNEYNQLKAVCGNRKWIGQGSVIIITTRDVGLLTRLDVDYVYGMDKMDEDESLQLFSFHCFGDAKPKEDFSELSRNVVAYCGGLPLALEVLGSYLFDKTSKKVWLGVLSILEKIPNDEVQRKLRISFDSLSNDMEKDIFLDVCCFFIGKDRGYVTEILNGCELCADVGIPVLIERSLIKVEKNNKLGMHPLLQEMGREIIRENSRKDPGKHSRLWSQKEVVEVLTKNTGTEAIEGLVLKMHLTSRDCFKTDSFQKMERLRLLQLHHVQLDGNYGYLSKQLKWISWHGFPSNCLPNSFCMNDVIAIDLKYSHLRFVWKQSQDLKWLKVLNLSHSRYLTETPDFSRLPILEQLILKDCPSLLAIHKSIGDLCNILLINLKDCTSLSNLPKEIYKLKSVKTFILSGCSKIDKLEEDIAQMESLTTLIADNTAVKRVPVSIVISKSIGYISLCGFEGLARNVFPSIIQSWMSPTMNPLLFICPYPGASCSLVSMNTQNNTLGELAPMLRSLPNLRSVLLRYETESQLSKLVETFLVERDVNVSELGISRHQLRSSLIGVGSYKAYFDILNDKISKGLVTNEACEVSLPIDNKPYWLAHTGEGQSVFFTVPEDCGMKGMTLCIVYLSNPEIKPTECLTSVLIANYTKRTLQIHRQETVTSFNDEDWQEIISHLAGGDKVEIFVTFGHDLVVKKTAVYLMYGESNDIEIEPTNCESNDVEIELPHCESNNIEIKAICIPNDIESKPMHCEANDIKIAAMNSESNVLEMKSDPKPNGNGCIRFFKKFAMCDW 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01446 1093 SMART till_3 17 159 IPR000157 GO:0007165
Vimu9g01446 1093 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 449 IPR027417 -
Vimu9g01446 1093 Pfam NB-ARC domain 209 425 IPR002182 GO:0043531
Vimu9g01446 1093 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Vimu9g01446 1093 Pfam TIR domain 18 182 IPR000157 GO:0007165
Vimu9g01446 1093 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 162 IPR035897 -
Vimu9g01446 1093 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 823 IPR044974 GO:0006952
Vimu9g01446 1093 Gene3D - 10 183 IPR035897 -
Vimu9g01446 1093 Gene3D - 184 348 IPR027417 -
Vimu9g01446 1093 PRINTS Disease resistance protein signature 389 403 - -
Vimu9g01446 1093 PRINTS Disease resistance protein signature 628 644 - -
Vimu9g01446 1093 PRINTS Disease resistance protein signature 219 234 - -
Vimu9g01446 1093 PRINTS Disease resistance protein signature 296 310 - -
Vimu9g01446 1093 SUPERFAMILY "Winged helix" DNA-binding domain 425 532 IPR036390 -
Vimu9g01446 1093 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 187 - -
Vimu9g01446 1093 Gene3D Ribonuclease Inhibitor 546 878 IPR032675 -
Vimu9g01446 1093 Gene3D - 354 439 IPR042197 -
Vimu9g01446 1093 SUPERFAMILY L domain-like 547 826 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01446 Vimu-Chr9 23104014 23108533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01446 7 745 WRKY Transcription Factor Family AT4G12020 29.036 1.01e-75 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01446 - - vun:114167037 1702.57