Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01442 ATGCTTCGTTTTCTCGCAACCGTGTCAAAAATTTCTCTGCCTTTACCGCAATCAGCAGTTATAAAAGCTCTGCGAGTGTTCAGTTCCACCACCACCTGTTCGACCATTTGCCTCACCCAAACCAAGATTGAAGTTGAAGATGATAAAAACAAATGGAGTGATGCTACTGAACTTTTGAGCAAATGGGGTTGCACTGATGATGATTTGGAGAGAATTTTCTCGCGCTGTCCGTCTTTGCGCAATGCTGATCCCACGCTGGTTCAATCTAAACTGTGCCTGCTTAGTGATTTGGGCTTGCGTGCTTCTCAACTTGTGAAGATTGTCAATTGTAGACCACGGTTTTTCCAGTGTCGGATTAACTCTTTTCTAGAAGAGAGGATTGAACATCTTACATCATTGTTTGAGTCCAGGGATGTGCTTCAAAAGGCCATTGTGAGGAACCCTTCATTGTTGCTATCGGAGGGTCGCTATGATGTTAAGGCTACAGTTGAGCTCTATGAGAAGTTGGGTGTTAAGAAGGGGGACTTAGTTCAGATGCTGCTTCTGCGGCCCACGGTTATTTCAAGGACTTCCTTTGATGATGAGAAGCTGGAATATTTAAGAAAGACTGGGCTTGCTACGGATTCAAAGATGTATAAATATATGGTGACTTTAATTGGAATCTCTCGCGTAGAAACTATCCGGGAGAAGGTGGCGAATTTGGAAAAGTTTGGGTTTTCTGAAGAGGAGATATTTGGTCTTATGGGGAGGTCTCCTAATGTTTTGACATTGTCGACAGACAAGGTTCAGAGGAACATGACTTTCATTTTGGGCACGATGAAGCTTGATGCTAAGATGGTTCTAAAGCAGCCGTATTTATTGTATGCCAACGTGGATACTGTTTTGAAGCCAAGAGTTCTACTAGCATTGAAGATTCAAGATATGGATTCAAAGTGGCAAATCATAGGACCAACTATAGTAAGTTTTCTTAGGATGCCAGAGAAGAGATTTTTGGACTTGTTGGTCAAATGCCATGGCGAGGATGTTGCCAATGAATTGATGGATTTCTATAAAAGGACAAAAGAGGTCAAGAGATTAGGAGAGTCATCAAAGAAGTGCAGTACGAGAGGATTCCCTTTCTGA 1122 0.4234 MLRFLATVSKISLPLPQSAVIKALRVFSSTTTCSTICLTQTKIEVEDDKNKWSDATELLSKWGCTDDDLERIFSRCPSLRNADPTLVQSKLCLLSDLGLRASQLVKIVNCRPRFFQCRINSFLEERIEHLTSLFESRDVLQKAIVRNPSLLLSEGRYDVKATVELYEKLGVKKGDLVQMLLLRPTVISRTSFDDEKLEYLRKTGLATDSKMYKYMVTLIGISRVETIREKVANLEKFGFSEEEIFGLMGRSPNVLTLSTDKVQRNMTFILGTMKLDAKMVLKQPYLLYANVDTVLKPRVLLALKIQDMDSKWQIIGPTIVSFLRMPEKRFLDLLVKCHGEDVANELMDFYKRTKEVKRLGESSKKCSTRGFPF 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01442 373 Pfam mTERF 57 151 IPR003690 GO:0003690|GO:0006355
Vimu9g01442 373 Pfam mTERF 115 331 IPR003690 GO:0003690|GO:0006355
Vimu9g01442 373 PANTHER CGI-12 PROTEIN-RELATED 42 338 IPR003690 GO:0003690|GO:0006355
Vimu9g01442 373 SMART mt_12 245 276 IPR003690 GO:0003690|GO:0006355
Vimu9g01442 373 SMART mt_12 209 240 IPR003690 GO:0003690|GO:0006355
Vimu9g01442 373 SMART mt_12 70 100 IPR003690 GO:0003690|GO:0006355
Vimu9g01442 373 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Vimu9g01442 373 SMART mt_12 141 172 IPR003690 GO:0003690|GO:0006355
Vimu9g01442 373 SMART mt_12 277 309 IPR003690 GO:0003690|GO:0006355
Vimu9g01442 373 Gene3D Transcription termination factor 3, mitochondrial 194 344 IPR038538 -
Vimu9g01442 373 Gene3D Transcription termination factor 3, mitochondrial 28 193 IPR038538 -
Vimu9g01442 373 FunFam Mitochondrial transcription termination factor family protein 123 344 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vimu9g01442 mTERF 7.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01442 K15031 - gmx:100799629 585.874