Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01435 ATGGCCTCATCGATTCCTTCCACGGAATTTGCCTCTTCATCATCCAAACTCCCATGGATGTACGATGTGCTCATCAACTTTACTGGAGACGACATCCGTAACAAATTTGTTTCCCACCTAGATTCTGCTCTTTCTAGTGTTGGATTCACGACTTTTCTTCACTACCACAATGCAGTGAAGCCCATGCACATCCAACAACCTATTCTGGATCTCTGTCGGGTAGCAATTGTTGTTTTCACCAAAACCTACTCTCAATCTGCTTGGTGTCTTCATGAACTTCAACAAATCATTGAATGGCACAAAACTTATTGCCGACATGTTTTGCCCGTATATTACGAGATTTCGCCATCTGATGTACGTCTTCAGAAGGGTGATTTTGGGAAAGCCTTCGAAGCTACTGCACGTCAAACCTTTTCAAGACAACAACTCAAGCATGGGATGTCCAGGTGGGGCCAAGCACTTACCAAAGCAGCAAATTTCTTTGGATGGGATGAGAGCAATTACAGGAGCGATGCTGAGCTAGTAGACAAAATTGTTAAGACTGTTCTTAATTTATCAGTCTTGTCTGCTACTAAATTTCCAGTTGCATTACAACCCAAGGTGGAAGATCTTATTCAAACTATCGAAAATAAATCCACGGAAGTTTGTACAATAGGGATATATGGAGTGGGAGGATCTGGTAAAACCACCCTTGCCAAAGCTATCTACCATCAAATTCATGGTACATTCACGGAGAAATGTTTCATTGAAGCTGATGTAGAAGATAAAGGATTAAGAAGTTGTGTTAATTTACAAGAACAACTTCTTTCAGATGTCTTAAAAATAAAGGTGAAAATACCTACAGAAGAGATGGGAAGAAGTATGATTCGAGAAAGACTTAACGGGAAAAGGGTGCTCATTGTACTTGACGATATGAATGACTATAGTCTATTACACCTATTGGGTGGTAGTTCATGCTTCGGAGAAGGAACTGTAATAATCATTACAACAACAGTTGGAGGCATGCTGAATATAAATCCAGTAGATTATGCATTTCGGATAAAACTAATGAACACAAACGAGTCTCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCTAAAGAAGAATACGATTACCTTGCAAGAAGAGTAATTTCTTGTTGTGGAGGACTACCTCTAACTCTTGAAGTCATTGGAGCTTATTTATTTGAAATGAACACAAACAAATGGGAAACTGTATTGTTTATATTAGAGAAAATTTCTGATGACAATGTTACAAAGATATTGAAAATAAGCTTTGATGGTTTACACAATGAAATGGAAAAAGATTTATTCCTTGATCTTTGTACATTCTTTGTTGGTAAAAGCAAAGTATATGTGACGAAGGTCCTAAATGGATGTGGAGTAGACGTTGATTGGGGAATAAGAGTTTTCATGGAGCGTAACCTCATAAAACTTACAAGAAACAATAAATTTGGAATACATCCTTTGGTACAAGGAATGGGAAGAAAAATTGTTGCTCAAAGAGGGGATGCTAGATATGCACTGGGAGAGACTGATGTCTTTTCATCCGAGAGGACAAAAATCTTGAGGGAATGTCCTGATGAGAAACTGTTTTTAACGAGAAAACGTTGCATCGAACCTTTTCTTTTAAGACACAGACCAAGACTGCTGAAACACGCTGGAAATCCTGGGGACCTTCGGAATTCTTCAGAATTCCTTCCTTACGACTTTTATCTGCAGGATGCAATATCGATTGATTTAAGACACAGTTTGCTTCGACTCGACTGGAAAAACCTGCAGGTTTTGACGTGGCTAAAAGTCCTTAATCTTAGTCATTCTAAGTACTTAACAAAAACTCCTGACTTTTCGAGACTTCCAAGTCTTGAAGAACTCATTCTCAAAGATTGCCCAAGATTGCACGAATGTGCTCCCGAGTTTCAACTATCTCAGCAAGTGAAAATTATTCTGGTTGAATATGGCGTGAATATTACAGAATCAAGAATTTCAAAGCATTGCTTAAGGTCTTCTTTGGTTGGTGTTGGAAGATACAATGAATTTTTAAGTACTGTATTGGAAAGCAGTGAGTCAGGTGATGTTTCTCTTCCAAGTGACAATGATCCTTATTGGTTGGCCCATATAGGTGAGGGACATTCTGTTTCGTTCACTGTGCCTCAAGATCGTGTCATGAAGGGAATAGTTTTGTGTGTTGTTTATTTATCAACCCGGGGAATCGTGACAACTGAATGTTTTACAAGTGTTTTAATTGTTAATTACACAAAGTCCACACTACTTATGCACAACCATGGCACAGTAATTTCCTTTAATGATGAAGATTGGCATGGTATAATGTCAAATTTAGGACCAGGAGACAAGGTGGAGATTTTTGTGACTTTTGGTCATGGATTGATGGTCAAGAACACAACTGTCTATTTGATATGTTGTGAATCACAAGACTTGGAAAGAGAGCCTGCGCTTAACAAAAATTCCCTCATTACATTCTTTAAGAAAATTGTAATGTGA 2511 0.3831 MASSIPSTEFASSSSKLPWMYDVLINFTGDDIRNKFVSHLDSALSSVGFTTFLHYHNAVKPMHIQQPILDLCRVAIVVFTKTYSQSAWCLHELQQIIEWHKTYCRHVLPVYYEISPSDVRLQKGDFGKAFEATARQTFSRQQLKHGMSRWGQALTKAANFFGWDESNYRSDAELVDKIVKTVLNLSVLSATKFPVALQPKVEDLIQTIENKSTEVCTIGIYGVGGSGKTTLAKAIYHQIHGTFTEKCFIEADVEDKGLRSCVNLQEQLLSDVLKIKVKIPTEEMGRSMIRERLNGKRVLIVLDDMNDYSLLHLLGGSSCFGEGTVIIITTTVGGMLNINPVDYAFRIKLMNTNESLELLSWHAFREAKPKEEYDYLARRVISCCGGLPLTLEVIGAYLFEMNTNKWETVLFILEKISDDNVTKILKISFDGLHNEMEKDLFLDLCTFFVGKSKVYVTKVLNGCGVDVDWGIRVFMERNLIKLTRNNKFGIHPLVQGMGRKIVAQRGDARYALGETDVFSSERTKILRECPDEKLFLTRKRCIEPFLLRHRPRLLKHAGNPGDLRNSSEFLPYDFYLQDAISIDLRHSLLRLDWKNLQVLTWLKVLNLSHSKYLTKTPDFSRLPSLEELILKDCPRLHECAPEFQLSQQVKIILVEYGVNITESRISKHCLRSSLVGVGRYNEFLSTVLESSESGDVSLPSDNDPYWLAHIGEGHSVSFTVPQDRVMKGIVLCVVYLSTRGIVTTECFTSVLIVNYTKSTLLMHNHGTVISFNDEDWHGIMSNLGPGDKVEIFVTFGHGLMVKNTTVYLICCESQDLEREPALNKNSLITFFKKIVM 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01435 836 SUPERFAMILY L domain-like 567 662 - -
Vimu9g01435 836 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 163 IPR035897 -
Vimu9g01435 836 SMART till_3 20 160 IPR000157 GO:0007165
Vimu9g01435 836 Gene3D - 18 180 IPR035897 -
Vimu9g01435 836 Gene3D Ribonuclease Inhibitor 558 672 IPR032675 -
Vimu9g01435 836 Pfam NB-ARC domain 200 415 IPR002182 GO:0043531
Vimu9g01435 836 Gene3D - 350 433 IPR042197 -
Vimu9g01435 836 SUPERFAMILY "Winged helix" DNA-binding domain 420 506 IPR036390 -
Vimu9g01435 836 Gene3D - 181 338 IPR027417 -
Vimu9g01435 836 Pfam TIR domain 21 187 IPR000157 GO:0007165
Vimu9g01435 836 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 444 IPR027417 -
Vimu9g01435 836 PRINTS Disease resistance protein signature 384 398 - -
Vimu9g01435 836 PRINTS Disease resistance protein signature 217 232 - -
Vimu9g01435 836 PRINTS Disease resistance protein signature 292 306 - -
Vimu9g01435 836 PRINTS Disease resistance protein signature 597 613 - -
Vimu9g01435 836 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Vimu9g01435 836 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 661 IPR044974 GO:0006952
Vimu9g01435 836 SMART AAA_5 214 351 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01435 Vimu-Chr9 23021053 23024493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01435 6 633 WRKY Transcription Factor Family AT4G12020 26.775 6.78e-45 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01435 - - vun:114166592 961.059