Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01431 ATGATACAGGTATTGGGAAGCAGTGAGTCATGTGATGTTTGTCTCCCAGGTGACAATGATCCTTATTGGTTGGCCCATATAGGTGAGGAACATTCTGTTTCTTTCACTGTGCCTCAAGATCGTGTCATGAAGGGAATAGTTTTGTATGTTGTTTATTTATCAATCCCGGGAATCGTGACAACTGAATGTTTTACAAGTGTCTTAATTGTTAATTACACAAAGTGCACATTACTGATGCACAACCATGGCACAGTAATTTCCTCTAATGATGAAGATTGGCATGGCATAATGTCAAATTTAGGATCAGGAGACAAGGTGGAGATTTTTGTGACTTTTGGTCATGGATTGGTGATCAAGAACACAGCTTTCTTTACCTCATCAATTCCCTCCATGGAATTCGCGTCTTCATCATCCAAACTCCCACGGTATTACGACGTGCTCATCAATTTCAATGGAGAAGACATCCTCACGAAATTTGTTTCTCATCTTGATTCTGTCCTCTCGTCCGTTGGACTCACCACTTTCCTTCACCATCAGAATGCAGTGGAGTCAACCCACGTCCAACAACCTATTCTCGATCTCTGTCGGGTAGTAATAGTTGTTTTCACCAAAACCTATTCTGAATCTGCCTGGTGTCTTCATCAGCTTCAACAAATCATTCAATGGCACCAAACTTATTGCCGACATGTTCTGCCTGTATATTACGAAATTCAGCCATCCGATGTACGTTTTCAGAAGGGTGATTTTGGAAAGGCCTTCAAAGAAACTGCACATCAAACATTTTCAGCACAACAACTTCAGCATGGCATGTCCAGATGGAGCCACGCACTCACCAAAGCTGCAAATTTATTTGGATGGGATGAGAGTAATCACAGGAGTGATGCTGAACTAGTGCACGAAATTGTTAAGAGCGTTCGTAATTCATCAGTTTTTTCTGCTACTAAATTCCCAGTTGGATTACAATACCCAGTGGAAGAACTGATTCAAACTATAAAAGATAAATCCATGGATGTTTGTACAATAGGGATATGTGGAATGAGAGGATCAGGTAAAAGCACCCTTGCCAAAGCCATCTACCATCAAATCCATGGTACATTCATGCATAAAAGTTTCATTGAAGGTATTGCACAATTTAGTGAACCAAGAGGGGGTATAAATTTTCAGGAACAACTTCTTTCAGATGTCATAAAAACAAAGGTGAAGATAGATACCCTTGAGATGGGAAAAAATATGATTCGGGACAGACTTATGGGGAAAAGGGTCCTCATTGTACTTGACGATATGGATGACTATCTTTTATTATTATATCTAAGGGAAAGTCGTTCATGGTTAAGTAAAGGAACTGTAATAATCATGACAACAACAGACGACGACCTATTTAAGGAATATCAAGTTCAATCTGTTTTTCGGATAAATCCAATGAATGAAAATAGGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAACCAAAACCAAAAGAAAAATACGATTACCTTGCAAGAAGATTAATTTCTCTTTGTGGAGGACTACCTCTAGTTCTTGAAGTCATTGGAAGTACCTTATTTGAAAGGACGGAAGTGGAATGGTATAGTGTATTGTTTAAATTAGAGAAAATTCCCAATTACAATGTTCAACAGAAATTGAAAATAAGCTTGAACCGTTTACGCAATCAATTGGAAAGGAATTTATTCCTTGATTTATGTTGTTTCTTTGTTGGTAAGGACAGAGACTATGCTACGAAAATCCTAAGTAGCTCTGTAGTAGAAGCTGATAGTGAAACAGGTGTTCTACATGACTTTAGAGTAGACGCTGATAGTGGAATAAGAGTTCTCATGGAGCGTAACCTCATTAAAGTCAAAAGGAATAACAAATTTGAAATGCATCCTTTACTACAAGAAATGGGAATAGCAATTTCTCGTGAAATTTCAGGAGAGAAACGTTGGAAGAACGGTCAACTGTTGTTTGATGTGGATGCAGAATATGCATTGAAAGTCAATGCTGGGAGAAAAGACTATGAGGTATTGCTTTCGACAAGAAGAGAACCATCAAGACTTCCGAAAGACGGTGTAAATTCTGAGAACCTTTATCCGAAACTGAGATGGATTAGTTTCCGTGGATTTTCTATAGAATACCTACCCAACTACTTTAATGCGCATGATACCATAGCGATTGATCTAAAACACAGTCTTCTTCGATTCTTTTTGGAAGAACCCCAGGTTTTCAAATCACTAAAAGTCCTTGACCTTAGTCACTCCATGTACTTAACACACACACCTGACTTTTCGAGACTACCAAATCTTGAAGAACTCATTCTAAAAGATTGTCCGAGATTGCAGAAAATTGACCCAATAGAGAACGATATAGTGCAAATGAAATCCTTGATAACTCTAGTTGCTGAAAATACAACTGTGAAAAAAGTGCCTTTTTCAATTGATAATAGTTGGGATGATATTGCGCCATTGCTTGGCAACTTGGCAAATCTTCGAAGTGTTTTGGTGCAATGTGACACCGACTTTCAATTATCTAAGCAAGTAAAAAATTTTCTGGTCGAATATTTTTCAAATATTACCGAATCAGAAATTTCAAAGCAGCACTTGAGGTCTTCTTTGATTGGTGTTGGAGCATACCATGAATTCTTCCATGCTGTCAGTGATAACATATCTGAGGTATTGGCAAGTAGTGAGTGTTCTGATGTCTTTCTTCCAGGTGACAACCGCCCTTATTGGTTGGCCTATATGGGTGAGGGAGATTCTGTTTCTTTCACTGTGCCTCCAGATAATGACATTAAGGGAATGGTTTTGTGTGTTGTTTATGTATCAACCCCTGAAATTGTGGCAACTGAATGTCTTAGAAGTGTTTTAATTGTTAATTACACAAAATTCACATTGTCTATACACATGCATGGCGAAATAATTTCCTTTAATGATATAGATTGGCAGACTATAATGTCAAATTTAGGATCAGGAGACAAGGTGGAGATTTTTGTGAATTTTTCTCAAGCATTGGTGGTCAAGAATACATATGTCTATCTTATATGTGGTGATTCACATTACTTGGAAAAAGAGCCTACTCCAAAGAAAGATTATCTCGTTAGATTCATAGAGAAAATTGTAAAGTGA 3123 0.3788 MIQVLGSSESCDVCLPGDNDPYWLAHIGEEHSVSFTVPQDRVMKGIVLYVVYLSIPGIVTTECFTSVLIVNYTKCTLLMHNHGTVISSNDEDWHGIMSNLGSGDKVEIFVTFGHGLVIKNTAFFTSSIPSMEFASSSSKLPRYYDVLINFNGEDILTKFVSHLDSVLSSVGLTTFLHHQNAVESTHVQQPILDLCRVVIVVFTKTYSESAWCLHQLQQIIQWHQTYCRHVLPVYYEIQPSDVRFQKGDFGKAFKETAHQTFSAQQLQHGMSRWSHALTKAANLFGWDESNHRSDAELVHEIVKSVRNSSVFSATKFPVGLQYPVEELIQTIKDKSMDVCTIGICGMRGSGKSTLAKAIYHQIHGTFMHKSFIEGIAQFSEPRGGINFQEQLLSDVIKTKVKIDTLEMGKNMIRDRLMGKRVLIVLDDMDDYLLLLYLRESRSWLSKGTVIIMTTTDDDLFKEYQVQSVFRINPMNENRSLELLSWHAFREPKPKEKYDYLARRLISLCGGLPLVLEVIGSTLFERTEVEWYSVLFKLEKIPNYNVQQKLKISLNRLRNQLERNLFLDLCCFFVGKDRDYATKILSSSVVEADSETGVLHDFRVDADSGIRVLMERNLIKVKRNNKFEMHPLLQEMGIAISREISGEKRWKNGQLLFDVDAEYALKVNAGRKDYEVLLSTRREPSRLPKDGVNSENLYPKLRWISFRGFSIEYLPNYFNAHDTIAIDLKHSLLRFFLEEPQVFKSLKVLDLSHSMYLTHTPDFSRLPNLEELILKDCPRLQKIDPIENDIVQMKSLITLVAENTTVKKVPFSIDNSWDDIAPLLGNLANLRSVLVQCDTDFQLSKQVKNFLVEYFSNITESEISKQHLRSSLIGVGAYHEFFHAVSDNISEVLASSECSDVFLPGDNRPYWLAYMGEGDSVSFTVPPDNDIKGMVLCVVYVSTPEIVATECLRSVLIVNYTKFTLSIHMHGEIISFNDIDWQTIMSNLGSGDKVEIFVNFSQALVVKNTYVYLICGDSHYLEKEPTPKKDYLVRFIEKIVK 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01431 1040 ProSiteProfiles TIR domain profile. 142 309 IPR000157 GO:0007165
Vimu9g01431 1040 Gene3D - 306 469 IPR027417 -
Vimu9g01431 1040 Gene3D - 137 305 IPR035897 -
Vimu9g01431 1040 Pfam TIR domain 144 305 IPR000157 GO:0007165
Vimu9g01431 1040 PRINTS Disease resistance protein signature 340 355 - -
Vimu9g01431 1040 PRINTS Disease resistance protein signature 508 522 - -
Vimu9g01431 1040 PRINTS Disease resistance protein signature 740 756 - -
Vimu9g01431 1040 PRINTS Disease resistance protein signature 415 429 - -
Vimu9g01431 1040 Gene3D Ribonuclease Inhibitor 684 898 IPR032675 -
Vimu9g01431 1040 SUPERFAMILY Toll/Interleukin receptor TIR domain 134 286 IPR035897 -
Vimu9g01431 1040 Pfam NB-ARC domain 321 560 IPR002182 GO:0043531
Vimu9g01431 1040 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 144 846 IPR044974 GO:0006952
Vimu9g01431 1040 SUPERFAMILY L domain-like 696 858 - -
Vimu9g01431 1040 Gene3D - 474 564 IPR042197 -
Vimu9g01431 1040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 300 568 IPR027417 -
Vimu9g01431 1040 SMART till_3 143 283 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01431 Vimu-Chr9 22928542 22934103 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01431 129 776 WRKY Transcription Factor Family AT4G12020 24.672 4.74e-42 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01431 - - vum:124845458 1278.08