Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01429 ATGGGAGGGATTGGCAAAACAACCATAGCCAAATCCATTTACAATGAAATTCGTCATGAATTCAAATATAGAAGTTTTCTAGCAAATATTAGAGAAGTTTGGGGAGGAGATCGGGGCCCAATTGATTTGCAAGAACAGCTTCTTTCAGATATCCTTAAAACAACAAAGACGAACGTGCATAGCATTGATTGGGGAAAAGGAAAGATCAAAGAAATGCTTTGCACAAAAAAGGTACTTGTTGTTCTAGATGATGTGAACATCTTTGAACAATTAAATGCATTATGTGGAAATCGTAATGAAATCAGTCGAGGAAGTGTAATAATCATTACCACCAGAAACGTACGTCTACTCAAAGAGATTGGAGTTGACTATGTGCATGGAGTCGAGAAAATGAATAAAATTGAGTCCCTTGAGCTTTTTAGTTGGCATGCTTTTAGGAGAGCAAATCCAACTAGGGACTTTTTTGAAGTCTCAAAGGAAGTAATCACATACTGCGGAGGGCTACCACTAGCTCTTGAAGTTCTTGGATCTTACTTATACAAGAGAAGAAAAGAAGAGTGGCAAAGTGTATTATCAAAACTAAAAGAAATACCAAATGATAAAATACAAGAGAAATTGAAAATAAGCTATGATGGTTTATCAGATCATATGGAGAAGGACATATTCCTTGACATATGCTGCTTCTTTATTGGTAAGGACAGAGGCTATGTCACAGAGATACTAAATGGTTGTGGACTTCATGCTGATATTGGAATACCAGTACTAGTAGAAAGGAGCCTCATCAAAGTTGAGAAGAATAACAAGCTCGGAATTCATGATTTACTACGTGACATGGGAAGAGAAATTGTTCGTCAAAGTTCACCGCTACCACAAAAGCGCAGTAGATTATGGGTTCATGATCACGTACTTGATATATTGACAGAACATACCGGAACAGAAGTCATTGAGGGATTAGCTTTGAAATTGCATAGACCTGGCAGAGTTCACTTCAGTGCCGAAACATTTGAGAACATGAAAAGATTGAGAATTTTGCAATTTGATCATGTCCAACTTGCTGGAGATTATGGGCATATTTCCAAACACTTGACATGGGTCTATTGGCGAGGATTTTCATTAAAATACATACCTGAAAACTTTTATCAGGGAAACGTAGTTGCTATTGACATGAAACACAGTAATCTTAAGCTAGTATGGAAGGAGCCCCTACAACAGGTATATCATCAACAGAGTTTTCTATGGTGA 1242 0.3728 MGGIGKTTIAKSIYNEIRHEFKYRSFLANIREVWGGDRGPIDLQEQLLSDILKTTKTNVHSIDWGKGKIKEMLCTKKVLVVLDDVNIFEQLNALCGNRNEISRGSVIIITTRNVRLLKEIGVDYVHGVEKMNKIESLELFSWHAFRRANPTRDFFEVSKEVITYCGGLPLALEVLGSYLYKRRKEEWQSVLSKLKEIPNDKIQEKLKISYDGLSDHMEKDIFLDICCFFIGKDRGYVTEILNGCGLHADIGIPVLVERSLIKVEKNNKLGIHDLLRDMGREIVRQSSPLPQKRSRLWVHDHVLDILTEHTGTEVIEGLALKLHRPGRVHFSAETFENMKRLRILQFDHVQLAGDYGHISKHLTWVYWRGFSLKYIPENFYQGNVVAIDMKHSNLKLVWKEPLQQVYHQQSFLW 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01429 413 PRINTS Disease resistance protein signature 165 179 - -
Vimu9g01429 413 PRINTS Disease resistance protein signature 72 86 - -
Vimu9g01429 413 Pfam NB-ARC domain 1 211 IPR002182 GO:0043531
Vimu9g01429 413 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 225 IPR027417 -
Vimu9g01429 413 Gene3D - 130 214 IPR042197 -
Vimu9g01429 413 FunFam Disease resistance protein (TIR-NBS-LRR class) 132 214 - -
Vimu9g01429 413 SUPERFAMILY "Winged helix" DNA-binding domain 200 306 IPR036390 -
Vimu9g01429 413 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 397 IPR044974 GO:0006952
Vimu9g01429 413 Gene3D - 1 125 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01429 Vimu-Chr9 22923804 22925340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01429 1 398 WRKY Transcription Factor Family AT5G45050 32.471 1.51e-54 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01429 - - vra:106773314 809.29