Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01422 ATGGATATCGCCTCCTCATCATACATACTCCCATGGAAGTACGATGTGCTCATCAACTTCACTGGAGAAGACATCCACAGAAAATTTGTTTCTCATCTCAATTCTGCCTTCTCTACTGTTGGTCTCACCACTTTCCTTCATCACCCCAATGCAGTGAAGTCGACTCACATCCAACAACCTATTCTCAGCCACTGTCATGTAGTAATTGTTGTTTTCACCCAAACCTATTCTAAATCAGCTTGGTGCCTTGATCAGCTTCAACAAATCATCAAATGGCACGAAACTTATTGCCGACATGTTCTTCCCGTTTATTATGAAATCCAGCCATCTGATGTACGTCTTCAGAAGGGTGACTTTGGAAAAGCCTTGAAGGCAACTGCTCAACAAACATTTTCAGGAGAGGAACTGGAGCATGGCATGTCCAGGTGGAACCATGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATCACAGGAGTGATGCTGAATTAGTGGACAAAATTGTTAAGAGCGTTGTTAATTTACCAATCTTGTCTGCTACTAAATTTCCAGTTAGATTACAATCATACGTGGAAGATCTGATTCGAACTATCAAAAGTAAATCCACTGAAGTTTGTATAATAGGAATAGGTGGAGAGGAAGGATCTGGTAAAACCACTATTGCCAAAGCGATCTACAATCAAATTCATTGGACATTCAAGGACAAAAGTTTCATTGAAAATATTTCACAAGTTAGCGGAATAAGAGGGCATCTTCGTTTAGTAGAAAAACTTCTTTTAGATGTCCTAAAACAAAAGGTGGAGATTCCTAGCATTGATGTTGGAAGAACTATAATTCGGGAAAAACTTTCTGGGAAAAGGATGCTCATTGTACTTGACGATGTTTCCAACTTTATTTTATTCGACATATGGGATTTTCGTAAATGGTCCGTTGAAGGAACTGTTATAATCCTTACATCAACATATATAGAACCGCTGAGAGGAGGTGATTCTGTCTTTTGGGTAAAGCGAATGAACGCAGAGGAGTCACTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAGTAAAACCAAAAGAAGAATACAAAGAGCTTGCAACAAGTGTAGTTAGATATTGTGGAGGACTACCACTAGCTCTTGAAGTCGTTGGAAGTACTTTATTTGAAAAGACCAAAGAAGAATGGAACCGTTTATTGATTAAATATGCGATAATTGACACGCATCTTGATTCAGAGATAATAAAAGTAAGCATAGAAGGTTCACTCAATGAAATGGAAAAAGATATATTCTTTGATGTATGTTTTTTCTTTGTTGGTAAGAGCAGAGCCTATGTTACGAAGATCCTAAATGAGTGTGGAGTAGACGCTGATATTGCAATAAGAGTTCTCATCCAGCGTAACCTCATCAAAATTAACAAGAACTACAAATTTGGAATGCATCCTTTACTACAAGAAATCGGAATAAAAATTATTCGTGAAAATTCAGGAAAGGATCTTGGGAAGAACAGGCGATTGTGGTTTGATAAGGATACAAAATATGGGACAGAAGCCCTGCAGTGGTTGCCTGTGAAACTGCTCACTGCCATCGAAAGTCTACAACCGACTGCAATTTCTTCTGACCTTCTTAATAAAATAAGATGGATCAGTTCGCATGGGCTTTCTTCAGAATGTCTGCCTAACAACATTTATGAGGATGATGCAACAGCTATTGATTTAAAACGCAGTCTTCTTCGATTTCTCTGGAAAACACCCCAGGTTTTGAGATCCCTAAAGGTCCTTAACCTAAGTCACTCCAAGCATTTAACTACAACCCCTGACTTTACCGGATTACCAAGTCTTGAACACCTCATTTTCAAGTATTGTTCTAGATTGCGCAAACTACACCAATCTATTGGATCACTCAACAGTCTTATACTGCTAAATTTGAAAGACTGTACAAGTCTAAACAATCTTCCAACAGAGATATATGACTTGAAATCTTTAAGAACTTTCATCCTCTCTGGTTGTTCCAAGATTGACATAATGGATAAAGATATAGCAAAGTTGGAATCCTTGATAACTCTAATTGCAGAAAATACAGCAGTGAAACATGTGCCTTTTTCAATTGTAAGCTCAAAAGGTATTGGATATATGTCCCCACGAGGATTTGAGGGATTATCTCATAATTTTTTTCCTTCCATCATTCGTTCTTGGATGTCCTCAACAACGAATCCCATTTCTTATATTCATTCGTTTTGCATGGATATGGAGGATAATACGATTGATATTGCACCGTTGTTTAGCACCCTTGCAAATATTCGAAATGTTTTGGTAGCATGTGACACCGAATTTCAGTTATCTAAGCAAGTGAAAAATATTTTGGTTGAATATTTTGCCAATATTACAGAATCAGGAATTTCAAAGCAGCACTTGAGGTGTTCTTTGATTGGTGTTGGAGCATACCATCAATTCTTCAATGTTGTCAGCGATAACATATATCAGGTATTGGCAAGCAGTGAGTCTGGTGATGTTTGTCTCCCAGCTGTCAATGATCCTTATTGTTTGGCCCATATGGGTGAGGGACACTCTGTTTCCTTCGTTGTGCCTGAAGATCGTGACATGAAAGGAATGACTTTGTGTGTTGTTTATTTATCAAATCCTAAAATCATTGAACCTGAATTTACTACTGTCATAATTGTTAATTACACAAAGTGTACATTCCAGATACACCACCATGGCACAGTAATTTCCTTTAAAGATGAAGATTGGCATGACCTAATGTCAAACTTAGAATCTGGAGACAATGTGGAGATTTTTGTGAATTTCGGTAATGGATTGGTGGTCAAGAACACAACGGTTTATCTGATATGTGCTGAATCAAAAAACATGGGAAAAGCGTCTGAGCCAAAGAAACATTCTCTCATTAGATTCGTTTTGAGATCCATAAAAGTCCTTAACCTCAGTCACTCCAAGTATTTAACTATAACACCTGACTTTACCGGATTACCAAGTCTGGAATACCTCATTTTGAAATATTGTTCAAGATTGAGCAAAGTACACCAATCTATTGGATCACTCAACAGTCTTATACTGCTAAATTTGAAATACTGTACAAGTCTAAACAATCTTCCAACAGAGATATATGACTTGAAATCTTTAAGAACCTTCATTCTTTCTGGTTGTTCCAAGATTGACATAATGGATAAAGATATAGCAAAGTTGGAATCCTTGATAACTCTAATTGCTGAAAATACAGCTGTGAAACTTGTTCCTTTTTCAATTGTAAGCTCAAAAAGCATTGGATATATATCCCTACGTGGATTTGAGGGATTATCTTATAATCTTTTTCCATCTATCATTCGGTCTTGGATGTCCCCAAAAATGAATCCAGTCTCTTATATTCATTCGTTTTGCATGGATACGGAGGATAGTACGATTGATATTGCACCATTGCTTAGCACCCTTGCAAATATTCGAAGTGTTTTGGTAGCATGTGACACCGATTTTCAATTATCTAAGCAAGTCAAAAGTATTTTGGATGAATACTTTCCGAGTATTACAGAATCAGGAATTTCAAAGCAGCAATTCAGGTGTTCTTTGATTGGTGTTGGAGCATACCATCAATTCTTCAATGCTGTCAGCGATAACATATATCAGGTATTGGCAAACAGTGAGTCTGGTGAAGTTTGTCTCCCAGCCGTCAATGATCCTAATTGTTTGGCCCATATGGGTGATGGACACTCTGTTTCTTTCATTGTGCCTGAAGATCGTGACATGAAAGGAATGACATTGTGTATTGTTTATTTATCAAATCCTAAAATCATTGAACCTGAATTTACTACTGTCGTAGTTATTAATTACACAAAGTGTACATTCCAGATACACCAGCATGGCACAGTAATTTCCTTTAAAGATGAAGATTGGCATGACATAATGTCAAATTTAGAATGTGGAGACAATGTGGAGATATTTGTGAACTTTGGTAATGGATTGGTGGTCAAGAACACAACGGTGTATCTGATATGTGATTATGTAGACTCGCTGAGCGATTGGAGTCACTCAACGGGTGGTTGTAGAGGTTGGTTTTCTGTCGGAGGACTTTTGCTTAGCGAGTCTGGGAGCACTCTTAGTTTTATTCAGATAGCGAGTAGAGTCACTCAACGAGTGGTTGTAGAGGTGGGTTTTCCGTCTAAGGACTTTCGCTCAGCGAGAGGGTCTGGGAGCTTTATTCGGATAGCGAGTGGAGTCCCTCAACGAGTGGTTGTAGAGGTTGGTTTTCTATTTGAGGACTTTCGCTCAACGACAAGGTGTGCTGAGCGACTGTACCATACAAGTGCACAAACTACCAATAGTTCAACATTCATATCCAATCCGGATGAGTCTTGTAGAGTACGAGATGTTTGGAGTGATCGTAGTCTTACCCTTCTTTTTGTTGTGTCAATTGAATGTTTTTGCATTATTCTTGCTAGCAATGATCATCCGGTGGATGTGAGTAGAGGACGAAGAGATATCTGTGGAACAGGCTCTTGA 4515 0.3829 MDIASSSYILPWKYDVLINFTGEDIHRKFVSHLNSAFSTVGLTTFLHHPNAVKSTHIQQPILSHCHVVIVVFTQTYSKSAWCLDQLQQIIKWHETYCRHVLPVYYEIQPSDVRLQKGDFGKALKATAQQTFSGEELEHGMSRWNHALTKAANFFGWDESNHRSDAELVDKIVKSVVNLPILSATKFPVRLQSYVEDLIRTIKSKSTEVCIIGIGGEEGSGKTTIAKAIYNQIHWTFKDKSFIENISQVSGIRGHLRLVEKLLLDVLKQKVEIPSIDVGRTIIREKLSGKRMLIVLDDVSNFILFDIWDFRKWSVEGTVIILTSTYIEPLRGGDSVFWVKRMNAEESLELLSWHAFREVKPKEEYKELATSVVRYCGGLPLALEVVGSTLFEKTKEEWNRLLIKYAIIDTHLDSEIIKVSIEGSLNEMEKDIFFDVCFFFVGKSRAYVTKILNECGVDADIAIRVLIQRNLIKINKNYKFGMHPLLQEIGIKIIRENSGKDLGKNRRLWFDKDTKYGTEALQWLPVKLLTAIESLQPTAISSDLLNKIRWISSHGLSSECLPNNIYEDDATAIDLKRSLLRFLWKTPQVLRSLKVLNLSHSKHLTTTPDFTGLPSLEHLIFKYCSRLRKLHQSIGSLNSLILLNLKDCTSLNNLPTEIYDLKSLRTFILSGCSKIDIMDKDIAKLESLITLIAENTAVKHVPFSIVSSKGIGYMSPRGFEGLSHNFFPSIIRSWMSSTTNPISYIHSFCMDMEDNTIDIAPLFSTLANIRNVLVACDTEFQLSKQVKNILVEYFANITESGISKQHLRCSLIGVGAYHQFFNVVSDNIYQVLASSESGDVCLPAVNDPYCLAHMGEGHSVSFVVPEDRDMKGMTLCVVYLSNPKIIEPEFTTVIIVNYTKCTFQIHHHGTVISFKDEDWHDLMSNLESGDNVEIFVNFGNGLVVKNTTVYLICAESKNMGKASEPKKHSLIRFVLRSIKVLNLSHSKYLTITPDFTGLPSLEYLILKYCSRLSKVHQSIGSLNSLILLNLKYCTSLNNLPTEIYDLKSLRTFILSGCSKIDIMDKDIAKLESLITLIAENTAVKLVPFSIVSSKSIGYISLRGFEGLSYNLFPSIIRSWMSPKMNPVSYIHSFCMDTEDSTIDIAPLLSTLANIRSVLVACDTDFQLSKQVKSILDEYFPSITESGISKQQFRCSLIGVGAYHQFFNAVSDNIYQVLANSESGEVCLPAVNDPNCLAHMGDGHSVSFIVPEDRDMKGMTLCIVYLSNPKIIEPEFTTVVVINYTKCTFQIHQHGTVISFKDEDWHDIMSNLECGDNVEIFVNFGNGLVVKNTTVYLICDYVDSLSDWSHSTGGCRGWFSVGGLLLSESGSTLSFIQIASRVTQRVVVEVGFPSKDFRSARGSGSFIRIASGVPQRVVVEVGFLFEDFRSTTRCAERLYHTSAQTTNSSTFISNPDESCRVRDVWSDRSLTLLFVVSIECFCIILASNDHPVDVSRGRRDICGTGS 1504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01422 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 434 IPR027417 -
Vimu9g01422 1504 Gene3D Ribonuclease Inhibitor 520 707 IPR032675 -
Vimu9g01422 1504 SMART till_3 13 153 IPR000157 GO:0007165
Vimu9g01422 1504 Gene3D - 340 419 IPR042197 -
Vimu9g01422 1504 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 966 1065 IPR044974 GO:0006952
Vimu9g01422 1504 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Vimu9g01422 1504 SUPERFAMILY "Winged helix" DNA-binding domain 414 512 IPR036390 -
Vimu9g01422 1504 Gene3D Ribonuclease Inhibitor 953 1154 IPR032675 -
Vimu9g01422 1504 Gene3D - 178 329 IPR027417 -
Vimu9g01422 1504 PRINTS Disease resistance protein signature 375 389 - -
Vimu9g01422 1504 PRINTS Disease resistance protein signature 587 603 - -
Vimu9g01422 1504 PRINTS Disease resistance protein signature 285 299 - -
Vimu9g01422 1504 PRINTS Disease resistance protein signature 210 225 - -
Vimu9g01422 1504 SUPERFAMILY L domain-like 534 705 - -
Vimu9g01422 1504 Gene3D - 10 177 IPR035897 -
Vimu9g01422 1504 SUPERFAMILY L domain-like 974 1103 - -
Vimu9g01422 1504 Pfam NB-ARC domain 193 401 IPR002182 GO:0043531
Vimu9g01422 1504 Pfam TIR domain 13 175 IPR000157 GO:0007165
Vimu9g01422 1504 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01422 Vimu-Chr9 22778641 22789999 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01422 14 704 WRKY Transcription Factor Family AT4G12020 26.892 2.23e-53 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01422 - - var:108346736 1477.61