Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01415 ATGCATACTGTTGGAGAGATAATAAAAGTAAGCATCGAAGGTTCACTCAATGAAATCGAAAAAGATATATTCCTTGATATATGTTGTTTCTTTGTTGGTGAGAGCAGAGCCTATGTTAGAAAGATCCTAAATGGCTGTGGAGTAGACGCTGATATTGGAATAAGAGTTCTCATCCAACGTAACCTCATCAAAATGAATAAGAACAACAAATTTGGAATGCATCCTTTGGTACAAGAAATCGGAATAAAAATTATTTATGAAAATTCAGAAAAGGATCCTGGGAAGAACAGGCGATTGTGGTTTGATAAGGATGCAAAATATGTAAGAACAATTCTTTACATGTGGTTTGAAACTTCTTTTGAAAGCGTTGACTTTCTCTACCTTCTTAAGAAGCTAAGATGGATCAGATTGCATGGGTTTTCTTCAGAATGTCTACCTAACAACTTTTATGAGGATGATTCAACAACGATTGATTTAAAACGCAGTCTTCTTCGATTTATATCCATAAAAGTCCTTAACCTCAGTCACTCCAAGCATTTAACTACAACCCCTGACTTTACAGGATTACCAAGTCTTGAAAACCTCATTTTGAAATATTGTTCAAGATTGAGCAAAGTACACCAATCTATTGGATCACTCAACAGACTTATACTGCTAAATTTGAAAGATTGTACAAGTCTAAACAATCTTCCAACAGAGATATATGACTTGAAATCTTTAAGAACCTTCATTCTTTCTGGTTGTTCCAAGATTGACATAAAGGATAAAGATATAGCAAAGTTGGAATCCTTGATAACTCTAATTGCTGAAAATACAGCTGTCAAACATGTTCCTTTTTCAATTGTAAGCTCAAAAAGCATTGGATATATATCCCTACGTGGATTTGAGGGATTATCTCATAATCTTTTTCCTTCTATCATTCGGTCTTGGATGTCTCCAATAATGAATCCCATCTCTTATATTCATTTGTTTTGCATGGATACGGAGGATAATACGATTGATATTGCACCGTTGCTTAATATTGCACCGTTGCTTAGCACCCTTGCAAATATTCGAAGTGTTTTGGTAGCATGTGACACCGATTTTCAATTATCTAAGCAAGTAAAAAGTATTTTGGATGAATACTTTCCGAGTATTACAGAATCAGGAATTTCAAAGCAGCACTTGAGGTGTTCTTTGATTGGTGATGGAGCATACCATCAATTCTTCAATGCTGTCAGTGATAACATATATCAGGTTCTTCTCTAA 1248 0.347 MHTVGEIIKVSIEGSLNEIEKDIFLDICCFFVGESRAYVRKILNGCGVDADIGIRVLIQRNLIKMNKNNKFGMHPLVQEIGIKIIYENSEKDPGKNRRLWFDKDAKYVRTILYMWFETSFESVDFLYLLKKLRWIRLHGFSSECLPNNFYEDDSTTIDLKRSLLRFISIKVLNLSHSKHLTTTPDFTGLPSLENLILKYCSRLSKVHQSIGSLNRLILLNLKDCTSLNNLPTEIYDLKSLRTFILSGCSKIDIKDKDIAKLESLITLIAENTAVKHVPFSIVSSKSIGYISLRGFEGLSHNLFPSIIRSWMSPIMNPISYIHLFCMDTEDNTIDIAPLLNIAPLLSTLANIRSVLVACDTDFQLSKQVKSILDEYFPSITESGISKQHLRCSLIGDGAYHQFFNAVSDNIYQVLL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01415 415 Gene3D Ribonuclease Inhibitor 116 390 IPR032675 -
Vimu9g01415 415 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 265 IPR044974 GO:0006952
Vimu9g01415 415 SUPERFAMILY L domain-like 112 308 - -
Vimu9g01415 415 SUPERFAMILY "Winged helix" DNA-binding domain 4 105 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01415 Vimu-Chr9 22656148 22657643 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01415 15 251 WRKY Transcription Factor Family AT4G12020 29.392 6.33e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01415 - - vum:124837950 642.114