Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01405 TATGAAATTCTGCTCTTACTCTTCTTCATCCTTCCACGGTCAAATCACCATCTCCTCTTTCTTTCGTTTTTCTCTTCCTTCCGCAATTGCTTAGATCTCGCCGATGTTCCGCTTCAGTTCATCAATTCTTATGTTTGTGCCAAGAAGACGGGTGATGTGACGGAGTTGCAGATAGGCGTTAAGCTTCTTTGCATACTACTGATGCGCTGCCTCTTTTTGCAGCATAAACCTGCAAAATGTGAAGTTCAGGCACACAAAGGTGATAAAGTCAAAGTACACTATCGGGGAAAGCTCACTGATGGAACTGTTTTCGATTCTAGCTTCGAAAGAAAAAATCCCATTGAATTCGAGCTTGGTGCTGGTCAAGTGATCAAAGGGTGGGACCAGGGATTATTGGGAATGTGTCTTGGTGAGAAGAGGAAGCTGAAAATACCATCAAGACTGGGCTATGGAGATCAGGGTTCCCAACCCTCTATTCCAGGTGGTGCAACACTGATATTTGACACCGAGCTGGTGGGAGTGAACGGTGTAAGTTTGGATGAAGAGGATAAGACAGGCTCTGAACTGTAG 570 0.4491 YEILLLLFFILPRSNHHLLFLSFFSSFRNCLDLADVPLQFINSYVCAKKTGDVTELQIGVKLLCILLMRCLFLQHKPAKCEVQAHKGDKVKVHYRGKLTDGTVFDSSFERKNPIEFELGAGQVIKGWDQGLLGMCLGEKRKLKIPSRLGYGDQGSQPSIPGGATLIFDTELVGVNGVSLDEEDKTGSEL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01405 189 PANTHER PEPTIDYLPROLYL ISOMERASE 35 176 IPR044609 GO:0000413|GO:0003755|GO:0061077
Vimu9g01405 189 Gene3D - 70 186 IPR046357 GO:0003755
Vimu9g01405 189 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 81 172 IPR001179 GO:0003755
Vimu9g01405 189 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 87 175 IPR001179 GO:0003755
Vimu9g01405 189 FunFam Peptidyl-prolyl cis-trans isomerase 68 176 - -
Vimu9g01405 189 SUPERFAMILY FKBP-like 74 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01405 Vimu-Chr9 22550165 22553679 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01405 85 177 Calmodulin-binding Proteins AT3G25230 53.763 2.66e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01405 K09569 - gmx:100305479 228.024