Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01388 ATGCATAGAGATGATGGAGGAAGCTTGTTGGTGGTGACAATGGAGGGAGGCCGAGACGGCTATGGTCAATGGTGCACCGGCGGCGGAGATGGAAGCAAAGGCGCCAAACGGAGGGATAAACATCGCGTAGGAAACAACCAAATCAGTTGGCAGTGGTGCACAACAGGTGTTTTCTGCCCCGATTGTTCTCAAAACCGAGGTAGTATCCCTATATCAGAAAAGCTAGCAGGTGAAAATTCCTCTTTGCAGGTGGGCAGCAGGGTTTTCTGCCTTGGTTTTCTCACAACCGAGATGGTGAGTATTGTATCTGATTTGGCAAAGTCAACCATGGAGAAATTGATTAATGCAACAATAGAACAATCACGTTATATTTGTTGCTTCACATGCATTACTGATGACTATGAAAAGGAAAGGGAAAATTTGATAGGAAAAAAGGAAACATGGGAAGAGTATGCTAGAGTGGCAACTAGAAGAGGTGATAACATACGAAAAGATGTCACACATTGGCAAAAGCAAGCTAAAGAACTTATTGAAGAAGACACCAAAATGAAGGTGAAGTGTTTTTTTGGATGGTGTCCTAACTGTATATGGCAATATAGTAGGGGGAAGGAATTGGAAAGCAAGACAGAGAAGATCAAAAGTCTGATGGAATGCAACTTTGAAAATGTTGGAATCACTCGTGATGTTCCTGACATTGAATATCACTCTTCTCAAAATTACATTTCTTTCAAAAGTAGAAAGTTGAAATTTGAAGAACTTCTTAATGCCTTCAAAGATGACAACAGCTATATGGTTGGATTGCAAGGGATGGGGGGCACAGGAAAAACAACATTAGCAAAAGAGGTGGGTAAGGAGCTTAAGAAGTCAAAATGTTTTAATAAAGTAATTGATACTACAATATCTAATACCCCTGATATAAAAAAGATTCAAGATGATATTGCAGGACCATTAGGACTGTCATTGAAGGGTTATACCGAATCAGAGAGGCCTAGAAAGTTGATGGATAGATTAACCAATGCTGACAAAATTCTTCTAATTCTAGATGATGTGTGGGGAGATATCAGTTTTGAAGAAATAGGTATTCCATTTAAGGACAACCACAACAATTGTAGAATTCTTGTGACCACTCGCGATATAAGAATATGCAACAAAATGGAATGTGAGAAGATAATTCAACTTGATATCTTACCGGAGGAAGAGGGATGGATATTGTTCCAAAAGCATGCTGCTTTAAGTGATAAATCCTCTAAAAGTATTCTTGATATTGGTCGCAAAATTTCCAAAGAATGTAAAGGATTGCCAATTGCCATTGTTGTTATTGCTCGTAGTTTAAAGGGCCAAACACGTAAAAAAGAATGGGATTTAGCCTTAAAATCCTTACAAAAGTCCATGCGCATACCTGGTGATGATGAAAATTGGAGTGAAGTTTATACATGTCTAAAGTATAGCTATGATAATATGAAGAATAAAACAGCTAAGAATTTGTTCCTTCTATGTTCCTTGTTTCGAGAAGATGAAGAAATACCTGAAGAACTTTTAGTCAGGCTTGCCATAGGAGCAGGTCTCGTCGAGCAAATTGATGTTGATTACAATTACGATGCATATCGTAATGAAGTTATTGTAGCAAAATACAAACTCATAGATTCATGTTTATTATTGAATGAAGAATTTGAAAGTGTAAAAATGCATGATTTGGTTCGTGAAATGGCTTTATCGATAGCTAACAAAGAGATTGTGGCAGTGAATACATCTAACAAGAATGCAATGACAATGGTTGAAAAGGGGAAGAATATTAAATATTTGTTGTGCGAAGGTAAGAGCAAAGATCTATTTTCCTTGAAGTTTGATGGATCTAAACTTGATATTCTAATTATCTATCTGAATGAAATGGAAGATTATTATGTCGAAGTCCCAGATCCATTCTTTGAAAATGTATCAAGATTCCGAGTTTTGTATTTATCAAACAATACTTATAAAGAATCAACGATGTCATTACCACAATCAATTCAATTGCTAACCAATCTTCGATCTTTACTCCTTGAAAGTTTCACCTTAGGTGACATCTCTATTCTTGGAAAACTACACGGCCTTGAGACTCTCGAGTTAGTGAAATGTTGGTTAGTTGAATTGCCGAGAGAGATTGCAAAATTGGGAAAACTTCAATTGTTGAAATTGAATGATTGTATGTTCAAACGGAACAATTCATTTGAAGTGATTGAAAGTTGCAGTTCATTAGAAGAGTTGTATCTCATTCATGAAGGCATTTCAAAAACTTCTCATAAAGTACAACTTCCTAACTATCAAAGGTTTTGTATATTAGACTTTTCTTGCTTCTTCATGACGAAGGAATTTTTTGCAAGAAACTCCTTGAATATGTTCATGGCTGATGAAGTTTTCTCTAAAGAGACATTCAAGAATCTAGTGCAAAAAGCAGAAATTCTATGTTTAAATGGACTTGAAGGAGTATGGAAAAGTCTCATACCTGACATTATATTTCCAGATGATGATGAAGGTATGAATAATCTAGTTGAGATTGCTTTGAAAGATATTTCACAAATCGCATGCCTAATTGACAATAATGACTCTCGTGTGCAAAATGCCTTATCCAAGTTGGTTGTACTTAAACTTAAAAATATGGAAAATTTGAAAGAAATATGCAGTGGACCCCTTCCCTTTGAATTTCTGAAAAATTTAGAAAAAATCATTCTATCTGATTGCATACATTTTGAAGGAACATTGTTTAAGAGCAACATATCTCTCTACAATCTTAAGCACTTGTCTATATCGGAATGTCCAATGTTGACATCTTTGTTTGAGTTGTCGACAACACAAACCCTAGTGTTGTTGGAGGACTTATCGATAGACAGATGTGAACAACTGAAAAGTATAATAAAAGATGAAGGCAAAAGGAAAGATTCAGGAGAAGAGATAATTGATGCTGATAATGATAACAAGAGTATTGTTTCAGTATTTCCAAATTTAACCACTCTTCATGTCGCCCATTGTCCCCTGTTACATTCTATACTTCCAGTGGTTGTTCCTCGAAATGTTCCAAAACTTGAATCTATTTATGTAGTGTATTGTGAAAGACTAAAATACATATTTTGCCCATTCCAAGATAAGCATGAAGAGGAAGAATCACATCAAGAATTAAAGGATCTCCTATTCACTACTTTGAAACGACTTGTTCTTGAATACTTGCCTAATTTTTTAGACATTTTCATGTGTCCATCAGTAAAGAAGTCATCTTCCAAAGATGAGTCGAAAGAACAAAAGGAATCAAACCCCATGAAATGTGAGATTTTACATTGGATCCATAAATATAGAAACAAACGGAGAACTACAAAAATTTCTTTGGATTCCACAGATCAATTGCAAGACTCTTCTCACTCAATGGTAAATGACTCCAATGCAAATGATGTTATTGCGCAAGAAATTACTGTCATTTTGACAGAAGTTGCATTCAATAATACACCTCAGATGCATGTGGGCTCCAACATTTTTCTGACTCTACAAAACGTTACAGAGTTATTAATTGATAAATGTAAAAAAGTTGAAGTACTATTTTGTGCTTCTATGTTAGAATGTTTACCATATCTGCATGCAATTACCATATTTGGATGCAATGAATTAAAACAAATAATTGGTGAGGATACAAAGAATCACAGAAAGCCATTTTTTCCTAGACTTAAAGCACTTGTCATAGAAGAATGCAACAAATTGAAAAGTGTCTTTCCCATCTCAATTTCCAAAACGCTACCAAAGTTAGAAGTTCTGGTAATCGTAAAAGCAAGTATGCTAGAGGAAGTATTCGAAGGGAACAGCGATGAACAGGTTGAGATTCCAAATCTGAAAACTGCAGTATTTGCTGAACTACCAAGCCTTCGCCAGAAGATTGAATTTCTCACTGTAAAGCATAGTTGGGTGAAGAATGGTCCAAAATTTTCCTTGTCTTCATCCCTTCCTAGTTTTGAAGATATTCTTGCTTCTTCCAAAGGATATTTTAAAGAAGATCGGGATATATCAGAAAGATTAATTGTTATTCTTTGTGGTCTTTATCTTTTTGGAGAGATTGGCAGTCGAATGCCAATAGGCTATGAAGTTGCAACTCAAGGTGAAGTAACATCGATAAGCAGTAAATGGAGGCATGCTAAGATTAGAGACAGCCCAATACTTAAACAGATTGACGAAGACAACCAACGTCAAAATGACGTTGGATCAAATGAGTTGGAGGAAGTAGAGAACCAAAGCCAAGAAACAATCGAAGATGAACACAATCTTCGGATACCATCCATAATATCACCAATAGAAACTCCTATGTACAAAACAGATTCACCAGAAAATGAAGAACAAATGACGATACCTTCTTCAAATCTTAACATGGAGCTTGCTACAACCAAAAATGTCAATGATGGAGAGTTTGAGAGAACATCTAACTCGGTGGTTTCTCAAAATACTAATACTACAGGGTCAGAACTGACGTATCACCATGTAAAGAACATATCACTGGAGATGGCGGATAATCTTGATGAAGATTCTAAAACTGAAGTAGCATCAGGGAGTGAGTTGACTGCATCAAAGGGAATAAAGAGAACATGTGAAGAAGGAACCATATCACCACATGCAGAGACAATAGTGTTGTCAACTGATTCAGAATCAGTTAGTTCACTACTTCACTTATCAGAACATGGTGAAGCTCGAGTATCTGTACCATTTTCAGTTGTGAATATAGAACTTGAAGATGTTGGTGTTGGAGACATTCAAGAAGCTTCTCCAGGTTATTAG 4785 0.3592 MHRDDGGSLLVVTMEGGRDGYGQWCTGGGDGSKGAKRRDKHRVGNNQISWQWCTTGVFCPDCSQNRGSIPISEKLAGENSSLQVGSRVFCLGFLTTEMVSIVSDLAKSTMEKLINATIEQSRYICCFTCITDDYEKERENLIGKKETWEEYARVATRRGDNIRKDVTHWQKQAKELIEEDTKMKVKCFFGWCPNCIWQYSRGKELESKTEKIKSLMECNFENVGITRDVPDIEYHSSQNYISFKSRKLKFEELLNAFKDDNSYMVGLQGMGGTGKTTLAKEVGKELKKSKCFNKVIDTTISNTPDIKKIQDDIAGPLGLSLKGYTESERPRKLMDRLTNADKILLILDDVWGDISFEEIGIPFKDNHNNCRILVTTRDIRICNKMECEKIIQLDILPEEEGWILFQKHAALSDKSSKSILDIGRKISKECKGLPIAIVVIARSLKGQTRKKEWDLALKSLQKSMRIPGDDENWSEVYTCLKYSYDNMKNKTAKNLFLLCSLFREDEEIPEELLVRLAIGAGLVEQIDVDYNYDAYRNEVIVAKYKLIDSCLLLNEEFESVKMHDLVREMALSIANKEIVAVNTSNKNAMTMVEKGKNIKYLLCEGKSKDLFSLKFDGSKLDILIIYLNEMEDYYVEVPDPFFENVSRFRVLYLSNNTYKESTMSLPQSIQLLTNLRSLLLESFTLGDISILGKLHGLETLELVKCWLVELPREIAKLGKLQLLKLNDCMFKRNNSFEVIESCSSLEELYLIHEGISKTSHKVQLPNYQRFCILDFSCFFMTKEFFARNSLNMFMADEVFSKETFKNLVQKAEILCLNGLEGVWKSLIPDIIFPDDDEGMNNLVEIALKDISQIACLIDNNDSRVQNALSKLVVLKLKNMENLKEICSGPLPFEFLKNLEKIILSDCIHFEGTLFKSNISLYNLKHLSISECPMLTSLFELSTTQTLVLLEDLSIDRCEQLKSIIKDEGKRKDSGEEIIDADNDNKSIVSVFPNLTTLHVAHCPLLHSILPVVVPRNVPKLESIYVVYCERLKYIFCPFQDKHEEEESHQELKDLLFTTLKRLVLEYLPNFLDIFMCPSVKKSSSKDESKEQKESNPMKCEILHWIHKYRNKRRTTKISLDSTDQLQDSSHSMVNDSNANDVIAQEITVILTEVAFNNTPQMHVGSNIFLTLQNVTELLIDKCKKVEVLFCASMLECLPYLHAITIFGCNELKQIIGEDTKNHRKPFFPRLKALVIEECNKLKSVFPISISKTLPKLEVLVIVKASMLEEVFEGNSDEQVEIPNLKTAVFAELPSLRQKIEFLTVKHSWVKNGPKFSLSSSLPSFEDILASSKGYFKEDRDISERLIVILCGLYLFGEIGSRMPIGYEVATQGEVTSISSKWRHAKIRDSPILKQIDEDNQRQNDVGSNELEEVENQSQETIEDEHNLRIPSIISPIETPMYKTDSPENEEQMTIPSSNLNMELATTKNVNDGEFERTSNSVVSQNTNTTGSELTYHHVKNISLEMADNLDEDSKTEVASGSELTASKGIKRTCEEGTISPHAETIVLSTDSESVSSLLHLSEHGEARVSVPFSVVNIELEDVGVGDIQEASPGY 1594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01388 1594 FunFam Probable disease resistance protein At1g61300 227 390 - -
Vimu9g01388 1594 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1018 1290 - -
Vimu9g01388 1594 MobiDBLite consensus disorder prediction 1396 1422 - -
Vimu9g01388 1594 SUPERFAMILY L domain-like 561 1247 - -
Vimu9g01388 1594 Gene3D Ribonuclease Inhibitor 1115 1285 IPR032675 -
Vimu9g01388 1594 Pfam NB-ARC domain 258 486 IPR002182 GO:0043531
Vimu9g01388 1594 Gene3D - 395 483 IPR042197 -
Vimu9g01388 1594 Gene3D - 221 392 IPR027417 -
Vimu9g01388 1594 Gene3D - 484 572 IPR036388 -
Vimu9g01388 1594 Gene3D Ribonuclease Inhibitor 573 775 IPR032675 -
Vimu9g01388 1594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 236 499 IPR027417 -
Vimu9g01388 1594 Gene3D Ribonuclease Inhibitor 832 1040 IPR032675 -
Vimu9g01388 1594 PRINTS Disease resistance protein signature 430 444 - -
Vimu9g01388 1594 PRINTS Disease resistance protein signature 918 934 - -
Vimu9g01388 1594 PRINTS Disease resistance protein signature 264 279 - -
Vimu9g01388 1594 PRINTS Disease resistance protein signature 337 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01388 Vimu-Chr9 22323024 22330341 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01388 241 602 WRKY Transcription Factor Family AT5G45050 25.676 3.85e-16 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01388 - - var:108346730 2481.06