LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu9g01384	ATGGTGAGCATTGTATCTGATTTGGCAAAGTCAAATCTGGAGAAATTGATTAATGCAACAATAGAACAATCACGTTATATTTGTTGCTTCACATGCATTACTGATGACTTTGAAAAGGAAAGGGAAGATTTGATAGCAAAAAGGAAAACATGGGAAGAGTATGCTAGATTGGCAACTAGAAGAGGTGATAATATACGAGAAGACGTAACACATTGGCAAAAGCAAGCTAAAGAACTTATTGAAGAAGACACCAAAATGAAAGTTAAGTGTTTTTTTGGATGGTGTCCTGACTGCAAATGGCAATATAGCAGGGGGAAGGAATTGGAAAGTAAGACAAAGGAGATTAGAAGACTTGCTGAACGCAACTTTGAAAATGTTGGAATCACTCGTGATGTTCTTGACATTGAATATCACTCTTCTCAAAATTACATTTCATTGGAAAGTAGAAAGTTGAAATTCGAAGAACTTTTTAATGCCTTGAAAGATGACAACAACTATATGATTGGATTGCAAGGGATGGGGGGCATAGGTAAAACAACATTAGCAAAAGAGGTGGGTAAGGAGCTTAAGAAGTCAAAATGTTTTAATCAAGTCGTTGATACTACAATATCTAATACCCCTGATATAAAAAAGATTCAAGACGATATTGCAGGACCATTAGGACTGTCATTGAAGGATTATACCGAATCAGAGAGGCCTAGAAAGTTGAAGGATAGATTAACAAAGGGTGACAGAATTCTTCTAATTCTAGATGATGTGTGGGAAAAAATCAGTTTTGAAGAAATAGGTATTCCGGACAACCACAAGAATTGTAAAATTCTTGTGACCACTCGCCATATAAGAACATGCGACGTAATGGGATGTAAGAAGATAATTGAAGTTGATATCTTACCAGAGGAAGAAGGATGGATATTGTTCCAAAAGTATGCTGGTTTAAGTGATAATTCCTCTAAAAGTATTCTTTATAAAGGTAGCAAAATTTCAAAAGAGTGTAAAGGATTGCCAATTGCAATTGAAATTATCGCCAGTAGTTTAAAGGGTGCACGACCTCTAGAAGAATGGGACGTAGCCTTAAAATCCTTGGAAAAGTCCATGCACGTACACAATGCTGATGAAAGTTTGAGAAAAGTTTATACATGTCTAAAGTATAGTTATGACAATATGAAGGATGAAACAGCCAAGAAATTGTTCCTTTTATGTTCTTTGTTTCGAGAAGATGAAGAAATATCCGAAGAACTTTTAGTCAGACTTGCTAAAGGAGCAACTCTCATTGAGAAAATTGATGACGATTACAGTTACGATGAATGTCGTAAGAAAGTTATTGTAGCAAAATATAAACTGATAGATTCATGTTTACTATTGAGTTGTAAATCTGGAAGAGTAAAAATGCATGACTTGGTTCGTGAAATGGCGTTGTGGATAGCTAACGAGGAGATTGTGGCAGTGAATACAACTAAGAAGAATGAAATGACAATGGTTGAAAAGGGGAAGGATATTAAATATTATTTATTATGCGAAGGAGAAATAAATGATTTGTTTTCCTCCAAGTTTGATGGATCTAAACTTGATATTCTTATTGTCTACATGAATGACGATGGTCCTGTGGAAGTCCCTAATTCCTTCTTTGAAAACATACCAGGGCTTCAAGTTTTGATTTTATCAAATAATCGAAATAAGAAAGCAATTTTCCAATTTCCTCAGTCAATTCAATTGTTGACCAATATCAAATCTTTATACCTCAAACATTTCAAATTAGGTGACATCTCGATTATTGGAAACCTACAGGCCCTTGAGACTCTGGAGTTGGTTGAATGTATGATGGATGAATTGCCTAGGGAGATTGGAAAACTGGCGAATCTTAAATTACTAAAGTTGAATTATTGTCGTTTTGAAAGGAGCAGTGTATTTGAAGTGATTAAAAGTTGTTCTTCATTGGAAGAGTTACATTTAATAACCACTTATGATAACAAAATTTTTAAAGATTGCCATCTAGAGCTTCCTAACTATCAAAGGTTTTGTATAGGGGAACATGATCAGAGCTTCGTGGTAAAATTTTACCCTGAATGGTTTTTAAGGAATACCCTGGATGTGGTTAACGCTATGGAAATTTTTTCTGAGGAGACATTGAAGAATCTAATGCAAAAAGCAGAAATTCTCAGATTAAGGGGATCTATAGGAGTATGGAAAAATCTCATACCTGATATTATTTTTCCTGAAGATGAATCTACGAGTAATCTGATTGAGATTCTTTTGAAAGATAACTCACAACTCACATGCCTAATCGACAATAATGATTCTCTTGTGCAACAAAGTCCCTTATCCAGGTTGGTTACGCTTAAACTTGAAGGAATGAAAAATTTGAAAGAAATATGCAATGGACCCCTTCCCTATGAACTTCTAAAAAATTTAGAAACAATCAGTCTATATAATTGCAATCATCTTCAAGGCGCATTGTTTAAGAGCAAGATCTCCCTCTACAATCTTAAAGAGTTGTCTATCTTGGGATGTAACATGTTGACATTTATTTTTGAGTTGTCAGCCGCACAAAGCCTATTGTCCTTGAAGACATTGTCGATAATGTCTTGTGAACAATTGAAAAGTATAATAAGAGATGAAAACAAATTGAAAGATTGTGGAGAAGAATTAGTTGATACTCATAATGATAATAAGAGTACTATTTCAATATTTCCAAATTTAACCTCTCTTTTTGTCGCTTTCTGTCCTCAGTTACAATTTATACTTCCAGTGACTGCTGTTGCTCAAAAAATTCCAAAACTTGAAAAGATTAGCATATCAAACTGTGATGGGTTAACATACTTATTTGGCCGAAACCAACATGAGCATTTAGAGGAAGATTTACATCAAGAATTAAAAGACGCCATATTCACATCTCCAAAATATGTTTATCTACATAACATGCCTAATTTTGTGGACATTTTTCAAAAATGTGATGAGTCCTTGTGTTCATTAGTAAAGAAGTCAACTTCCAAAGATGAGACCAAAGGACAAATAGAATCAAAGTCCATAAAATATAAGTTTGGGTGGGAGCATGAGGCATTTTCTGACTATGGTGAACACTTGCAGGTAAATGAGCCAAATGCAAATGATGTGATTGCACAAGAAATGAGTGTCAAACTGGAAAATTTGTCATTGAATGATACATCCAAGATTCTTTTTACTCTACAAAACGTTACTGAGTTACGTATTACTAGATGTGAAAAAGTTGAAGTACTATTTTGTGCTTCTATGCTGGAATGTTTACCATATTTAGGTGCACTTAACATCTATAGATGCAATGAATTAAAACGGATTATTGGTGAGGATGCAAAGAATCAGAGAAAACCATTTTTCCCAAGGCTGAAAGCACTTATCATAAGAGAATGCAACAAACTGAAATGCATCTTTCCCATTTCAACTTCCGAAATGGTACCCATGTTAGAAGCACTGTTAATAATGGAAGCAAGTTTGCTAGAGGAAGTATTCGAAGGAAACAGTGATGAAAAGGTTAAGATTCAAAATCTGAAAACTGCAGGCTTTGTTGAACTTCCAAGCCTTCACCAGAAGATTGAATTTTTTACCGTAAAACATTGTTTGGTGAGGAATTGTCCAAAACTGTGCATCTCTTCATTCCCTCAAGATCTCGAACATTTTTCATATTCTATTATTGAAGAATATTTCAAAGATTGGCATCTCGATAAGATAATACGTCGAGTTCTTGATGATCATAAACGCCAAGAGATTCGCAATGAGAATCGATGGAGAGAAGACTCTGCAATTGGGACTGAAGTTGAAGCAGCATCATTCAAAGGGAGTGAGTTAACTTCATCACAGAACAATGCAAACCAATCTACTCTTGCCAACATTGATGAAGACAACAAACAACATGAGGATGTAGTGAAAGAAAGCACAGAAAGAGTAGAGGAAGAACAACAAATTGTTGGAAAAGCTTCATCAATGCCAATATCACCGACAGATTTTCCTCTACATAAAACACATTCACCAGTAAAGGAAGAAGAAGAAATGGCCATACCTTCTTCAAATCTTAACACAGAGCCTCCTATAACTAAAGATGTTAATGATGGAGATTTTCAGGGAACATCTAACTCAGTGGTTACCAATTCTCAAAATACTTATTCTACAGATCAACGTATAAAGAAGATATTAACAGAGATAGCAGGTGATCTTGACGAAGACTCTAAAACCACAGAGATTAGGAGTCAGAATGAAATGACAAAAGCCAAAGAAGACTTTTCAATTGATGCTAAAGCTGAGGTATTATCAGGAACGGACTTCACTTCATCACCATATGAGAAGACGATAGCGTTGTCAACTGATTCAGAATCAGAACATGGTGAAGCTCAAATATCTGTACCGTTTCCAGTTGTGAATATAGAACTTGAAACCACTGAAGATGTTGGTGTTGGAGACATTCAAGAAGCTTCTCCAGATAAACTTGCTGAGATCACTCAAGATTCAAGTTCTGGTTATACTGTAAGAAGGGAGCTTGAGGAACTTGTCTCTAAGAAGCATTTGGGTTCAGAGAACTTGGCTCTGTTAAGCAATTTCCTTGTGAAGCATCCTTCTCTTCGTTTAGCAGACGATGCCATGAGTGAGAGATACAAGGGCTTTGCCTACACTTGTCTGGCTCAGCTTTTGAAGTTTCTCCAAAGCCATAGTGTGTTTGATATGTTGGGGTCAAGCCACTCTGAATTTCTTGAATTGTTAAAAGAACTGCGTAATTGTGGTTTCAATAAGGATTGGTTGGATGATGTTGAAAAACTCAAAAACGTGATTTGA	4797	0.3544	MVSIVSDLAKSNLEKLINATIEQSRYICCFTCITDDFEKEREDLIAKRKTWEEYARLATRRGDNIREDVTHWQKQAKELIEEDTKMKVKCFFGWCPDCKWQYSRGKELESKTKEIRRLAERNFENVGITRDVLDIEYHSSQNYISLESRKLKFEELFNALKDDNNYMIGLQGMGGIGKTTLAKEVGKELKKSKCFNQVVDTTISNTPDIKKIQDDIAGPLGLSLKDYTESERPRKLKDRLTKGDRILLILDDVWEKISFEEIGIPDNHKNCKILVTTRHIRTCDVMGCKKIIEVDILPEEEGWILFQKYAGLSDNSSKSILYKGSKISKECKGLPIAIEIIASSLKGARPLEEWDVALKSLEKSMHVHNADESLRKVYTCLKYSYDNMKDETAKKLFLLCSLFREDEEISEELLVRLAKGATLIEKIDDDYSYDECRKKVIVAKYKLIDSCLLLSCKSGRVKMHDLVREMALWIANEEIVAVNTTKKNEMTMVEKGKDIKYYLLCEGEINDLFSSKFDGSKLDILIVYMNDDGPVEVPNSFFENIPGLQVLILSNNRNKKAIFQFPQSIQLLTNIKSLYLKHFKLGDISIIGNLQALETLELVECMMDELPREIGKLANLKLLKLNYCRFERSSVFEVIKSCSSLEELHLITTYDNKIFKDCHLELPNYQRFCIGEHDQSFVVKFYPEWFLRNTLDVVNAMEIFSEETLKNLMQKAEILRLRGSIGVWKNLIPDIIFPEDESTSNLIEILLKDNSQLTCLIDNNDSLVQQSPLSRLVTLKLEGMKNLKEICNGPLPYELLKNLETISLYNCNHLQGALFKSKISLYNLKELSILGCNMLTFIFELSAAQSLLSLKTLSIMSCEQLKSIIRDENKLKDCGEELVDTHNDNKSTISIFPNLTSLFVAFCPQLQFILPVTAVAQKIPKLEKISISNCDGLTYLFGRNQHEHLEEDLHQELKDAIFTSPKYVYLHNMPNFVDIFQKCDESLCSLVKKSTSKDETKGQIESKSIKYKFGWEHEAFSDYGEHLQVNEPNANDVIAQEMSVKLENLSLNDTSKILFTLQNVTELRITRCEKVEVLFCASMLECLPYLGALNIYRCNELKRIIGEDAKNQRKPFFPRLKALIIRECNKLKCIFPISTSEMVPMLEALLIMEASLLEEVFEGNSDEKVKIQNLKTAGFVELPSLHQKIEFFTVKHCLVRNCPKLCISSFPQDLEHFSYSIIEEYFKDWHLDKIIRRVLDDHKRQEIRNENRWREDSAIGTEVEAASFKGSELTSSQNNANQSTLANIDEDNKQHEDVVKESTERVEEEQQIVGKASSMPISPTDFPLHKTHSPVKEEEEMAIPSSNLNTEPPITKDVNDGDFQGTSNSVVTNSQNTYSTDQRIKKILTEIAGDLDEDSKTTEIRSQNEMTKAKEDFSIDAKAEVLSGTDFTSSPYEKTIALSTDSESEHGEAQISVPFPVVNIELETTEDVGVGDIQEASPDKLAEITQDSSSGYTVRRELEELVSKKHLGSENLALLSNFLVKHPSLRLADDAMSERYKGFAYTCLAQLLKFLQSHSVFDMLGSSHSEFLELLKELRNCGFNKDWLDDVEKLKNVI	1598

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu9g01384	1598	Gene3D	-	127	294	IPR027417	-
	Vimu9g01384	1598	FunFam	Probable disease resistance protein At1g61300	130	290	-	-
	Vimu9g01384	1598	Gene3D	-	296	384	IPR042197	-
	Vimu9g01384	1598	SUPERFAMILY	RNI-like	859	1158	-	-
	Vimu9g01384	1598	Gene3D	Ribonuclease Inhibitor	699	963	IPR032675	-
	Vimu9g01384	1598	Gene3D	-	385	468	IPR036388	-
	Vimu9g01384	1598	MobiDBLite	consensus disorder prediction	1268	1294	-	-
	Vimu9g01384	1598	Pfam	NB-ARC domain	154	387	IPR002182	GO:0043531
	Vimu9g01384	1598	Coils	Coil	1285	1312	-	-
	Vimu9g01384	1598	Gene3D	Ribonuclease Inhibitor	469	677	IPR032675	-
	Vimu9g01384	1598	MobiDBLite	consensus disorder prediction	1268	1288	-	-
	Vimu9g01384	1598	PRINTS	Disease resistance protein signature	798	814	-	-
	Vimu9g01384	1598	PRINTS	Disease resistance protein signature	240	254	-	-
	Vimu9g01384	1598	PRINTS	Disease resistance protein signature	331	345	-	-
	Vimu9g01384	1598	PRINTS	Disease resistance protein signature	167	182	-	-
	Vimu9g01384	1598	Gene3D	Ribonuclease Inhibitor	964	1219	IPR032675	-
	Vimu9g01384	1598	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	141	400	IPR027417	-
	Vimu9g01384	1598	PANTHER	NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED	924	1205	-	-
	Vimu9g01384	1598	SUPERFAMILY	L domain-like	459	976	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu9g01384	Vimu-Chr9	22287197	22297003	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu9g01384	144	478	WRKY Transcription Factor Family	AT5G45050	25.000	7.04e-13	72.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu9g01384	-		-	vun:114167346	1747.64