Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01353 ATGGCTGTGTTGTATTTTGCTTTGCTCATTCTGCTCTTTCTCTTTTCTCTTAAGCTCTTGTTCCAAACAAGAAGATTTAGAAACCTTCCTCCAGGACCACTTTCTTACCCTATAATCGGAAACCTCTCCCAACTCAAACAGCCTTACCACCGCACATTCTCTCAAATGTCCCAAAAATACGGTTCAGTCTTCTCTCTCTGGTTCGGTTCCCGACTCGTTGTCGTCCTTACTTCACAATCCGCCGTGCAAGAATGCTTCACCAAAAACGACATCGTCTTGGCCAACCGACCTCACTTTCTCTTTGGCAAATACATCAGCTACAATAACAGCACCATCCTTCACTCCTCCTACGGCGACCACTGGCGCCACCTCCGCCGCATCTTGTCGCTGGAGGTTGTCTCAACGACCCGTTTAAACTCCTTCTACGAGGTTCGAAGGGACGAACTCATGAGGCTGGTGCAAAAGCTCGCTAAACTCTCATCAAACCAGTTCACGAAAGTGGATCTAAAAACCATGCTCTTTGGTGATGATTGTGATATAAATGATGTGGAGAAAGCAAAAGAATTCAAAGATATCATCAAAGAATTAGTAATATTAGCAGGAGTTAATAATCGTGGAGACTTCTTGCCTATCGTGAGATGGTTTGATTTTGATAATTTGGAGAAGAAGCTAAAAGGAATTGGTAAAAGAACTGATGCATTCTTACAAGAACTCATCGAAGAGCATCGTAATGGAAAGAACAATGGGAATACTATGATAGATCATCTTCTTGCTCAACAACAATCACAACCTGAACAGTACACCGACCAAATCATCAAAGGACTTTCTTTGAGCTTACTACTTGCCGGAACAGATACATCAGCTTTAACTTTAGAATGGGCAATGGCCAATTTATTGAACCATCCAGAAGTTATAAAAAAGGCAAAAAAGGAAATAGACACTCATGTAGGATCAAATCGTCTTGTAGAGGAATCTGACATGTCAAAACTTCCTTACATTCAAAGCATTGTTTACGAGACACTTCGATTGCATCCGGCTGCTCCAATTTGGTCACCACATTTGTCTTCAGAAGATTGCATCGTAGGAAAATATAATCTCCCAAAAGACACAATTGTGTTGGTGAATGCCTGGGCTGCTCATATGGATCCAGAAATGTGGAGTGACCCAACACACTTTAAGCCTGAAAGGTTTGAAAACGAAAGTGAAATAAATAGGTTACTTTCATTTGGGTTAGGGCGAAGGGCTTGCCCTGGATCAAACTTGGCTCAACGCACAGTTAGCTTATCCGTAGCCTTATTACTTCAATGCTTTGAGTGGAATCGAATTGGTAAGGAAGAAATTGATATGTCCGAAGCAAATGGAATTACTATTTCAAGAAAAAATCCATTGGAAGCTATGTGCCAACTTCGTCAATCACCAACAGTTAAGGATATGTATTGA 1440 0.4132 MAVLYFALLILLFLFSLKLLFQTRRFRNLPPGPLSYPIIGNLSQLKQPYHRTFSQMSQKYGSVFSLWFGSRLVVVLTSQSAVQECFTKNDIVLANRPHFLFGKYISYNNSTILHSSYGDHWRHLRRILSLEVVSTTRLNSFYEVRRDELMRLVQKLAKLSSNQFTKVDLKTMLFGDDCDINDVEKAKEFKDIIKELVILAGVNNRGDFLPIVRWFDFDNLEKKLKGIGKRTDAFLQELIEEHRNGKNNGNTMIDHLLAQQQSQPEQYTDQIIKGLSLSLLLAGTDTSALTLEWAMANLLNHPEVIKKAKKEIDTHVGSNRLVEESDMSKLPYIQSIVYETLRLHPAAPIWSPHLSSEDCIVGKYNLPKDTIVLVNAWAAHMDPEMWSDPTHFKPERFENESEINRLLSFGLGRRACPGSNLAQRTVSLSVALLLQCFEWNRIGKEEIDMSEANGITISRKNPLEAMCQLRQSPTVKDMY 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01353 479 SUPERFAMILY Cytochrome P450 30 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01353 479 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01353 479 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01353 479 PRINTS E-class P450 group I signature 334 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01353 479 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01353 479 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01353 479 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01353 479 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01353 479 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01353 479 CDD CYP81 61 463 - -
Vimu9g01353 479 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01353 479 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01353 479 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01353 479 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01353 479 PANTHER CYTOCHROME P450 82C3-RELATED 8 471 - -
Vimu9g01353 479 Pfam Cytochrome P450 30 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01353 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Vimu9g01353 479 Gene3D Cytochrome P450 19 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01353 479 FunFam Cytochrome P450 family protein 21 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01353 Vimu-Chr9 21865665 21868198 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01353 12 471 Cytochrome P450 AT4G37330 51.667 3.74e-179 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01353 K13260 - gmx:100811727 712.605