Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01345 ATGGGTGAGGAATATGACATTATATCGAAGGAGAGAATAAAGCCATCTTCCCCAACTCCTCTTCATCTTCAGCACTTCAAACTCTCTTTTCTCGATCAATTGGCTCCTTCATTCCGTGTTCCCATTCTGCTCTTTTACTCTGCCTCTGATGTCAGAACCTTTGCTGCCACTGACCTCAATGCACTGTCACAAAAGTTGAAAACTTCTCTCTCAGAAGTCCTCACTCTCTATTACCCATTTTGCGGAAGACTCAGAGACTCCTCAATCATTGAGTGCAACGACGAGGGTGTTCTTTTCATCCACTCTAAACTCCCCATTGAGCTCTCAAACATTCTCAAAAACCCTCAACTTCACACCCTCTATGAACTTCTCCCATGTCCTCCTTACAACCTTGAACCACAACAAAGGGACACGTTCGGGATCATGGCAGTTCAGTTCAGCCAATTCAAGTGTGGGGGCATAGCCCTTGGCGTGTGCTTCTCACACAAGATCGCTGATGCTTCCACTGCAGCATCGTTTCTCAACGCTTGGGCTGCAACAGCACTTGGAAACGGCAATGGCAACCTCGTTCCACCTCCAATGGAAGAGGCAAGTCTGCTTTTCCCACCGAGGAACATATCTGTTGACATGACAAGTGGCATGGTTGGCCAAGAAAAGACTGTAACGAAGAGATTCATATTTAATGGCAGCAGTATTTCTAGATTGAGACAAACCATAGGGTGCCCCAGTTTGAATCCCTCACGCGTTGAAGCCGTGACGACGCTGCTATGGAAATCATCACTGGAAGCAGCAAAAGAAAGTATAGATTATGGGGAAGAAAAAATTGTTGCTTCTGGGGTATCCCACACTGTGAACATTCGCAGCAGAATGGTTCCATCTTTGTCGAAGCATTCAGTTGGAAACATTTGGCAATACGCGGTGTCTTCGTTGGTGGAAGTGGAGGGGGAAGTGGGGTTGCGTGATTTAGCAGAGAGAATGAGGGAGGCCATAGGAAAAGTTGATGGAGATTACATAAAGAAACTTCAGAGTGATGAGTTTGTTGAAGTAGTTGAGGGTATAGAAGGAGCAAGGAGACTGGCTGAACAAAAGGGTATTCGTGGTTATGGGTTTACGAGTTGGGTAGGGTTTGAGTTCTATGAAGTTGATTTTGGATGGGGAAAGCCTATTTATGCTAGCACCATTCCTGTGCCCATAAAAAATTTGGGAACTTTGATGAGCACAAAGGATGGAGATGGCATAGAGGCATGGCTTACCTTGACCACACGTGACATGGCTCGGCTTGAGCACGATGCAGAATTTCTGAACTTTGCGTCGTTTGATTCTTAA 1326 0.4578 MGEEYDIISKERIKPSSPTPLHLQHFKLSFLDQLAPSFRVPILLFYSASDVRTFAATDLNALSQKLKTSLSEVLTLYYPFCGRLRDSSIIECNDEGVLFIHSKLPIELSNILKNPQLHTLYELLPCPPYNLEPQQRDTFGIMAVQFSQFKCGGIALGVCFSHKIADASTAASFLNAWAATALGNGNGNLVPPPMEEASLLFPPRNISVDMTSGMVGQEKTVTKRFIFNGSSISRLRQTIGCPSLNPSRVEAVTTLLWKSSLEAAKESIDYGEEKIVASGVSHTVNIRSRMVPSLSKHSVGNIWQYAVSSLVEVEGEVGLRDLAERMREAIGKVDGDYIKKLQSDEFVEVVEGIEGARRLAEQKGIRGYGFTSWVGFEFYEVDFGWGKPIYASTIPVPIKNLGTLMSTKDGDGIEAWLTLTTRDMARLEHDAEFLNFASFDS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01345 441 PANTHER F21J9.9 6 438 - -
Vimu9g01345 441 Gene3D - 4 209 IPR023213 -
Vimu9g01345 441 Gene3D - 217 436 IPR023213 -
Vimu9g01345 441 Pfam Transferase family 7 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01345 Vimu-Chr9 21716400 21717948 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01345 6 428 Monolignol Biosynthesis Gene Families AT5G48930 23.884 8.02e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01345 - K13065 gmx:100792323 534.258