Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01333 ATGCAGGAGAGGATTCAAGCAGGTAAGAGACTCCTTGAAGCTAAGCGAATTGCTGAAGAAAATGAAAGACAACGGAATTTAACCCTGAGAAAAGCGGAAAAAGAAGAAGAGAAAAGAGCTAGAGAGAGAGTTCTACAGAAACTAGAGCAGGATAAGAAGTTAAGTCCAGTTTATACAACTACAAAAGCTGAGCAGTTAAGAGAATGTCTGAGGAATCTGAAGCGTAACCATCAGGATAGAGTTGGAAGTTTAAATGGAGGTGTAGAATTTCTTGAGCTATGTGGTTTTGAGAGAACTGGTGACTTCTTGTATCTTTCTCAAGAAAAGGTTGACATGGCACTGTTGAATTCAGCTGGTTTTGTCTTAAATTCTGCAATGACAAACCCTTTCTTTGGAGTTTTAAGTACTACTCACAATCAAGTATGA 426 0.385 MQERIQAGKRLLEAKRIAEENERQRNLTLRKAEKEEEKRARERVLQKLEQDKKLSPVYTTTKAEQLRECLRNLKRNHQDRVGSLNGGVEFLELCGFERTGDFLYLSQEKVDMALLNSAGFVLNSAMTNPFFGVLSTTHNQV 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01333 141 Gene3D - 62 125 - -
Vimu9g01333 141 Pfam PUB domain 78 111 IPR018997 -
Vimu9g01333 141 SUPERFAMILY PUG domain-like 65 130 IPR036339 -
Vimu9g01333 141 Coils Coil 17 54 - -
Vimu9g01333 141 PANTHER F13M7.16 PROTEIN 78 134 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01333 8 134 C2H2 Transcription Factor Family AT1G04850 43.216 5.28e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01333 K24348 - gmx:100781260 195.667