Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01326 ATGGAAGGTCGCCGGAGGATAACGCTTTACGAACAAATGACAACTAGCAACGGCAATACCAACAGCGGCAGTAGCAGCCGAGACTCACTAGCGAGCCTCATGCTCGAAGACGTCGTATTCAAGAAGGCCGAAGCCGACGCCGAAGCGAGCCGTGACCTGAGCCGAAGCCGGACTCTCCAAGACATCATTCGCGAAGAGAAGCCTAACGGAGACGCGAAGGATCGCAACTCCTGGAAAGCCTTCAAGGAGAAGCTTCGGCTCAAGCGCGCTATCGGCTTGGCTTGGTCCTCCGCAACTACTCACAGTAATAACAGCAATAATAACGACAATGAAGACGGACGTTTACCTCAAACTCGCCTCCTCTCGGACGACGTGGCGACTCAGCAGAACGACGTCGTTGTGGAGGACGCAAACGATTCAGATCCTATCGCGCGGTTCGGGTCTCCGACGGACAACACGGCGGCCGGCGGCGATTCCTCCGACGGGGAGAACAACCAGGAGGCTGCGGTTGGCGTGTCGCTGATGGATTTGTTGGAGGAAGCAGAGCAGGAAATGGATTTGTACAGAGTGAGCGATGATGATGTGGTGGCAGATTTTGAGAAGAGAGATGAAGATGAAGCGGAAGATGAAGAAAAAGAAGGTTTGGTGGAGTATAACTGCTGCGTCTGCATGGTGCGCCATAAAGGCGCGGCGTTTATCCCGTGCGGACACACCTTCTGCAGAATGTGTTGCAGAGAGATTTGGGCTAGCAGAGGGAATTGCCCTCTCTGCAATAATTTAATTTTGGAAATTCTTGATATTTTCTGA 807 0.5291 MEGRRRITLYEQMTTSNGNTNSGSSSRDSLASLMLEDVVFKKAEADAEASRDLSRSRTLQDIIREEKPNGDAKDRNSWKAFKEKLRLKRAIGLAWSSATTHSNNSNNNDNEDGRLPQTRLLSDDVATQQNDVVVEDANDSDPIARFGSPTDNTAAGGDSSDGENNQEAAVGVSLMDLLEEAEQEMDLYRVSDDDVVADFEKRDEDEAEDEEKEGLVEYNCCVCMVRHKGAAFIPCGHTFCRMCCREIWASRGNCPLCNNLILEILDIF 268
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01326 268 MobiDBLite consensus disorder prediction 9 28 - -
Vimu9g01326 268 MobiDBLite consensus disorder prediction 134 165 - -
Vimu9g01326 268 CDD RING-HC 220 257 - -
Vimu9g01326 268 ProSiteProfiles Zinc finger RING-type profile. 220 258 IPR001841 -
Vimu9g01326 268 Pfam Zinc finger, C3HC4 type (RING finger) 218 261 - -
Vimu9g01326 268 PANTHER OS01G0917900 PROTEIN 6 268 - -
Vimu9g01326 268 SMART ring_2 220 257 IPR001841 -
Vimu9g01326 268 MobiDBLite consensus disorder prediction 1 28 - -
Vimu9g01326 268 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 174 265 IPR013083 -
Vimu9g01326 268 SUPERFAMILY RING/U-box 219 264 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu9g01326 Vimu-Chr9 21537122 21540676 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01326 4 268 C3H Transcription Factor Family AT4G13100 36.667 1.70e-40 139
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01326 - - gmx:100819018 348.591