Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01317 ATGGCCAACCTGATTGTGTTGTTCAAAACGTTTCTCATAGAATTTCAATGTGCAGGTTTCTTTAGTCTTTCTTGTGGTGGAAGAACCAGTTTCAGGGATTCATCTAACATTTCGTGGGTACCAGACACCACCTACGTAACCACAGGAAAGACTACTACCATCACATACAGTGATGGTTCCAACTCACTGAACATCTCAGCTCGGTTCTTCCCAAATTCTAGAAGGCGAAAATGTTACAGAATACCAGCGAACAATTCAACCACTTTGGTTCTTGTTAGAGCAAAATTTGTGTACAAGAACTATGATGGACTTGGGAAACCCCCTAAGTTCTATGTTTCAATTGGGACATCTATTGCAGCCACCATAAATCTTGCTGAAGATGATCCATGGAGTGAAGAGTTTTTATGGACTGTCAACATGGATACACTGTCATTCTGCTTAATTGCAATGCCTGAAGGGGGTTCACCTGTAATTTCTTCTCTTGAAATCAGACCACTTCCTCAGGGAGCCTACACAAATGGCATGACAGATTTTCCTAACAAGTTGCTTAAGAAGAGTTATAGAATTGATTGTGGGCACTCAAATGATTCCATAAGAATATGGGATGCTGATAGAAGTTTCACACCCTTTCACGTTGCCATTGGGTTTAAGATTCAACTTAGCTTCAGACAGTCTAGTCTTGTAGAAGAACCACCAGTTGTTGTTCTTCAAACTGGGAGAGTTTTGGCAAGAAGTAATACTCTGACATACAACCTCCCTCTCGATCCATTAGGGGACTACTACATCATCCTCTACTTTGCAGGGATTCTTCCTGTTTTTCCCTCATTTGATGTTCTTATAAATGGAGAACTAGTAAAATCAAACTACAAAATAAATGGCTCTGAAATCAGTGCTTTATACTTAACGCGAAAGGGAATTGGGAGCTTGAATATAACATTAAAGAGTACCAGCTTTTATCCTCAGATCAATGCATTTGAGGTTTATAAGATAGTTGATATTCCAACTGATGCCTCATCAACCACAGTTTCAGCACTGCAGGTTATTCAGCAGGCCACTGGATTGGATCTTGGATGGCAGGATGATCCATGTCTGCCTTCCCCATGGGAGAAAATTCACTGTGAAGGAAACCTTGTTACATCATTAGACTTGCAGAACAATAGTTTAATGGGAACAGTACCTGATAGCTTGGGAGAGTTAGAGGACCTCCACTTACTGAATCTGGAAAACAACAACCTACAAGGTCCTATGCCACAGTCTTTGAACAAAGAAACATTGGAGATCAGGACATCTGGTAATTTGTGTCTTACCTTTTCCACAACATCATGTGATGATGATGCATCATCATCCAATCCTCCAATTGAAGCACCACAAGTTACTGTAGTTCCTCAGAAGAAGCACAATGTACATAACAATCTAGCAATCATACTAGCCACGGTTGGAGGAACCATAATAGCCTTTCTCTTAATGTGTATTTCAGTATTGATATACAAGACCAAACAACACTATGAAGCCTCCCACACATCAAGAGGAGAAATGGATACGAGGAACTGGGGTGCTGCAAAAGTATTTTCCTACAAAGAAATCAAAGTAGCTACAAGAAACTTCAAGGAAATCATAGGAAAGGGTAGTTTTGGATCTGTTTATCTTGGTAAACTTCCAGAAGGAAAATCTGTAGCTGTCAAAGTTCGTTTTGACAAATCTCAACTGGGTGCTGATTCATTCATCAATGAGGTTAATCTTTTATCAAAAATCCGGCATCAAAATCTTGTGTCTTTGGAAGGATTTTGTCATGAAAGAAAGCATCAGATATTGGTTTATGAGTACTTGCCTGGGGGATCCCTGGCTGATCATCTCTATGGTTGTCAAAAGATTTCCTTAAGCTGGGTGAGAAGGCTGAAAATTGCTGTTGATGCAGCAAAAGGTCTCTCTAAGCAAGTAACTCAAGCAGATGCAACTCATGTCACCACTGTTGTTAAGGGCACTGCTGGTTACCTTGATCCAGAGTATTATTCCACTCAACAGTTGACAGAGAAAAGTGATGTATATAGCTTTGGAGTTGTTCTTTTGGAACTCATTTGTGGAAGAGAGCCATTGACTCACTCTGGAAACCCTGATTCATTCAACTTGGTGTTATGGGCCAAACCATACTTGCAGGCTGGCGCATTTGAGATAGTGGATGAAGACATAAGAGGAAGTTTTGATCCCTTGAGTATGAAGAAAGCAGCTTTCATTGCTATAAAGTCAGTGGAGAGGGATGCATCACAGAGGCCATCTATTGCAGAGGTATTGACAGAGCTAAAGGAAGCCTACAATATTCAGCTCAGATTCCTTGAATCATTACAACGATTCATTCCTGTTTTTTTTCCTTTATCCCCTTCAAAAGAGAAAATCCAGAGGGAACTAAAGGTTCTCGTTTCTTTTCCTTTATCCCCCATCAAAAGAGAAAATCCAGAGGGAACTAAAGGTGCTCTACAGATGGAAGATCAGAGACCAATTGAGGTTCTTTACATAGGGAAGATCAGAGACCAATTCAGATTTTTTACAGAGGAAAGATCAGAGACCAATTCAGGGCTTGAACGAGCATCCCATTGCAATCATAAGGAGTCAGATGAGAGGCACAAGGGAGCATGA 2631 0.4052 MANLIVLFKTFLIEFQCAGFFSLSCGGRTSFRDSSNISWVPDTTYVTTGKTTTITYSDGSNSLNISARFFPNSRRRKCYRIPANNSTTLVLVRAKFVYKNYDGLGKPPKFYVSIGTSIAATINLAEDDPWSEEFLWTVNMDTLSFCLIAMPEGGSPVISSLEIRPLPQGAYTNGMTDFPNKLLKKSYRIDCGHSNDSIRIWDADRSFTPFHVAIGFKIQLSFRQSSLVEEPPVVVLQTGRVLARSNTLTYNLPLDPLGDYYIILYFAGILPVFPSFDVLINGELVKSNYKINGSEISALYLTRKGIGSLNITLKSTSFYPQINAFEVYKIVDIPTDASSTTVSALQVIQQATGLDLGWQDDPCLPSPWEKIHCEGNLVTSLDLQNNSLMGTVPDSLGELEDLHLLNLENNNLQGPMPQSLNKETLEIRTSGNLCLTFSTTSCDDDASSSNPPIEAPQVTVVPQKKHNVHNNLAIILATVGGTIIAFLLMCISVLIYKTKQHYEASHTSRGEMDTRNWGAAKVFSYKEIKVATRNFKEIIGKGSFGSVYLGKLPEGKSVAVKVRFDKSQLGADSFINEVNLLSKIRHQNLVSLEGFCHERKHQILVYEYLPGGSLADHLYGCQKISLSWVRRLKIAVDAAKGLSKQVTQADATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLTHSGNPDSFNLVLWAKPYLQAGAFEIVDEDIRGSFDPLSMKKAAFIAIKSVERDASQRPSIAEVLTELKEAYNIQLRFLESLQRFIPVFFPLSPSKEKIQRELKVLVSFPLSPIKRENPEGTKGALQMEDQRPIEVLYIGKIRDQFRFFTEERSETNSGLERASHCNHKESDERHKGA 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01317 876 ProSiteProfiles Protein kinase domain profile. 533 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu9g01317 876 Gene3D Ribonuclease Inhibitor 342 437 IPR032675 -
Vimu9g01317 876 Gene3D Transferase(Phosphotransferase) domain 1 643 773 - -
Vimu9g01317 876 SUPERFAMILY L domain-like 345 421 - -
Vimu9g01317 876 FunFam serine/threonine-protein kinase PBS1-like 500 608 - -
Vimu9g01317 876 Pfam Malectin-like domain 23 330 IPR024788 -
Vimu9g01317 876 Gene3D - 184 331 - -
Vimu9g01317 876 ProSitePatterns Protein kinases ATP-binding region signature. 539 561 IPR017441 GO:0005524
Vimu9g01317 876 SUPERFAMILY Protein kinase-like (PK-like) 508 764 IPR011009 -
Vimu9g01317 876 Gene3D Transferase(Phosphotransferase) domain 1 503 642 - -
Vimu9g01317 876 PANTHER OS07G0107800 PROTEIN-RELATED 21 770 - -
Vimu9g01317 876 MobiDBLite consensus disorder prediction 855 876 - -
Vimu9g01317 876 Pfam Protein tyrosine and serine/threonine kinase 535 642 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01317 Vimu-Chr9 21338253 21346313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01317 19 779 Receptor kinase-like Gene Family AT5G48740 51.712 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vimu9g01317 Malectin_like 1.8e-46 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01317 - - vum:124845082 1352.04