Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01299 ATGGGAATCAAAGCCATCCCATCAATAGCAGAAGCAAAGCTTTCAAGCATGGCTCTGTTGTATTTTGCTTTGCTCATTCTCTTCTTTCTCTTTTCTCTTAAGCTCTTATTTCAAACAAGAAGATTTAGAAACCTTCCTCCAGGCCCAATTTCTTACCCTATAATCGGAAACCTCTTCCAACTCAAACAGCCTTTCCATCGCACATTCACTCAAATGTCGCAAAAATACGGTCCAGTCTTCTCTCTCTGGTTCGGTTCCCGACTCGTTGTCGTCCTTACTTCACAATCCGCCGTGCAAGAATGCTTCGCCAAAAACGACATCGTCTTGGCCAACCGACCTCACTTTCTCTTTGGCAAATACATCAGCTACAATAACAGCACCATCCTTCACTCTTCCTACGGCGATCACTGGCGCCACCTCCGTCGCATCTTGTCGCTGGAGGTTGTCTCAACGAACCGTTTAAACTCTTTCTACGAGGTCCGAAGGGACGAGATCATGAGGCTGCTGCAAAAGCTCGCTAACCTCTCATCCAACCACTTCACGAAAGTGGATCTAAAAACCATGTTTATGGAGACATCATTTAACACTATGATGAGAATAGTGTCCGGAAAAAGACTCTTTGGTGATGATTGTGATGTTAACGATGTCGAGAAAGCAAAAGAATTCAAAGAAATCATCAAAGAGTTAGTAATATTAGCAGGAGTCAATAATCGAGGAGACTTCTTGCCTTTCGTGAGATGGTTTGATTTTGATAATTTGGAGAAGAAGCTAAAAGGGATTGGTAAGAGAACTGATGCATTCTTACAAGAACTCATTGAAGAGCATCGTAATGGAAAAAACAATGGAAATACTATGATAGATCATCTCCTTGCTTTACAACGATCACAACCTGAACAATACACCGACCAAATCATCAAAGGACTTTCTCTGAGCTTACTACTTGCCGGAACAGATACATCAGCTTTAACTTTAGAATGGACAATGGCTAATTTATTGAACCATCCAGAAGTTATAAAGAAGGCAAAAAAGGAAATAGACACTCATGTAGGATCAGATCGTCTCGTTGAGGAATCTGACATGTCAAAACTTCCTTACATTCAATGCATTGTTTACGAGACACTTCGATTGCATCCTGCTGCTCCAATTTGGTCACCACATTTGTCTTCAGAAGATTGTATTGTAGGAAAATATAATCTCCCAAAAGACACAATTGTGTTGGTGAATGCTTGGGCTGCTCATATGGATCCAAAAATGTGGAGTGATCCAACACACTTTAAGCCTGAAAGGTTTGAGAACGAAAGTGAAGTAAATAGGTTACTTTCATTTGGGTTAGGACGAAGGGCTTGCCCTGGATCAAACTTGGCTCAACGCACAGTTGGCTTATCCATAGCCTTACTACTTCAATGTTTTGAGTGGAAACGAATTGGTAAGGAAGAAATTGATATGTCTGAAGCAAATGGAATTACTATTTCAAGAAAAAATCCATTGGAAGCTATGTGCCAACTCCGTCAATCACCAACAGTTAAGAATATGTACTGA 1539 0.4081 MGIKAIPSIAEAKLSSMALLYFALLILFFLFSLKLLFQTRRFRNLPPGPISYPIIGNLFQLKQPFHRTFTQMSQKYGPVFSLWFGSRLVVVLTSQSAVQECFAKNDIVLANRPHFLFGKYISYNNSTILHSSYGDHWRHLRRILSLEVVSTNRLNSFYEVRRDEIMRLLQKLANLSSNHFTKVDLKTMFMETSFNTMMRIVSGKRLFGDDCDVNDVEKAKEFKEIIKELVILAGVNNRGDFLPFVRWFDFDNLEKKLKGIGKRTDAFLQELIEEHRNGKNNGNTMIDHLLALQRSQPEQYTDQIIKGLSLSLLLAGTDTSALTLEWTMANLLNHPEVIKKAKKEIDTHVGSDRLVEESDMSKLPYIQCIVYETLRLHPAAPIWSPHLSSEDCIVGKYNLPKDTIVLVNAWAAHMDPKMWSDPTHFKPERFENESEVNRLLSFGLGRRACPGSNLAQRTVGLSIALLLQCFEWKRIGKEEIDMSEANGITISRKNPLEAMCQLRQSPTVKNMY 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01299 512 Gene3D Cytochrome P450 38 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01299 512 PANTHER CYTOCHROME P450 82C3-RELATED 25 504 - -
Vimu9g01299 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Vimu9g01299 512 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01299 512 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01299 512 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01299 512 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01299 512 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01299 512 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01299 512 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01299 512 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01299 512 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01299 512 FunFam Cytochrome P450 family protein 37 506 - -
Vimu9g01299 512 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01299 512 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01299 512 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01299 512 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01299 512 Pfam Cytochrome P450 46 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01299 512 SUPERFAMILY Cytochrome P450 46 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01299 512 CDD CYP81 77 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01299 Vimu-Chr9 21121517 21124023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01299 26 505 Cytochrome P450 AT4G37370 53.402 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01299 K13260 - gmx:100811727 741.88