Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01298 ATGTCGCAAAAATACGGTCCAGTCTTCTCTCTCTGGTTCGGTTCCCGACTCGTTGTCGTCCTTACTTCACAATCCGCCGTGCAAGAATGCTTCGCCAAAAACGACATCGTCTTGGCCAACCGACCTCACTTTCTCTTTGGCAAATACATCAGCTACAATAACAGCACCATCCTTCACTCCTCCTACGGCGACCACTGGCGCCACCTCCGCCGCATCTTGTCGCTGGAGGTTGTCTCAACGAACCGTTTAAACTCCTTCTACGAAGTCCGAAGGGACGAGATCATGAGGCTGCTGCAAAAGCTCGCTAACCTCTCATCAAACCACTTCACCAAAGTGGATCTAAAAGCCATGTTTATGGAGACATCATTTAACACGATGATGAGAATCGTGTCTGGAAAAAGACTCTTTGGTGATGACTGTGATGTGAACGATGTCGAGAAAGCAAAAGAATTCAAACAAATCATCAAAGAGTTAGTGATATTAGCAGGGGTCAATAATCGTGGAGATTTCTTGCCTTTCGTGAGATGGTTTGATTTTGATAATTTGGAGAAGAAGCTAAAAGGAATTGGTAAGAGAACCGATGCATTCTTACAAGAACTGATCGAAGAGCATCGTAATGGAAAAAACAATGGAAATACTATGATAGATCATCTCCTTGCTTTACAACGATCACAACCTGAACAATACACCGACCAAATCATCAAAGGACTTTCTCTGAGTTTACTACTTGCCGGAACAGATACATCAGCTTTAACTTTAGAATGGACAATGGCTAACTTATTGAACCATCCAGAAGTAATAAAGAAGGCAAAAAATGAAATAGACACTCATGTAGGATCAGATCGTCTTGTAGAGGAATCTGACATGTCAAAACTTCCTTACATTCAATGCATTGTTTACGAGACACTTAGATTGCATCCTGCTGCTCCAATTTGGTCACCACATTTGTCTTCAGAAGATTGTATCGTAGCAAACTATAATCTCCCAAAAGACACAATTGTGTTGGTGAATGCTTGGGCTGCTCATATGGATCCAAAAATGTGGAGTGAGCCAACACACTTTAAGCCTGAAAGGTTTGAGAACGAAAGTGAAGTAAATAGGTTACTTTCATTTGGGTTAGGGCGGAGGGCTTGCCCTGGATCAAACTTGGCTCAACGCACAGTTGGTTTATCGATAGCCTTATTACTTCAATGTTTTGAGTGGAAACGAATTGGTAAGGAAGAAATTGATATGTCTGAAGCAAATGGAATTACTATTTCAAGAAAAAATCCATTGGAAGCTATGTGCCAACTCCGTCAATCACCAACAATTAAGAATATGTAA 1323 0.4142 MSQKYGPVFSLWFGSRLVVVLTSQSAVQECFAKNDIVLANRPHFLFGKYISYNNSTILHSSYGDHWRHLRRILSLEVVSTNRLNSFYEVRRDEIMRLLQKLANLSSNHFTKVDLKAMFMETSFNTMMRIVSGKRLFGDDCDVNDVEKAKEFKQIIKELVILAGVNNRGDFLPFVRWFDFDNLEKKLKGIGKRTDAFLQELIEEHRNGKNNGNTMIDHLLALQRSQPEQYTDQIIKGLSLSLLLAGTDTSALTLEWTMANLLNHPEVIKKAKNEIDTHVGSDRLVEESDMSKLPYIQCIVYETLRLHPAAPIWSPHLSSEDCIVANYNLPKDTIVLVNAWAAHMDPKMWSEPTHFKPERFENESEVNRLLSFGLGRRACPGSNLAQRTVGLSIALLLQCFEWKRIGKEEIDMSEANGITISRKNPLEAMCQLRQSPTIKNM 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01298 440 PANTHER CYTOCHROME P450 82C3-RELATED 1 433 - -
Vimu9g01298 440 CDD CYP81 6 425 - -
Vimu9g01298 440 FunFam Cytochrome P450 family protein 1 435 - -
Vimu9g01298 440 PRINTS E-class P450 group I signature 337 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01298 440 PRINTS E-class P450 group I signature 378 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01298 440 PRINTS E-class P450 group I signature 253 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01298 440 PRINTS E-class P450 group I signature 296 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01298 440 PRINTS E-class P450 group I signature 121 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01298 440 PRINTS E-class P450 group I signature 233 250 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01298 440 PRINTS E-class P450 group I signature 368 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01298 440 PRINTS E-class P450 group I signature 2 21 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01298 440 PRINTS E-class P450 group I signature 26 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01298 440 Pfam Cytochrome P450 2 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01298 440 SUPERFAMILY Cytochrome P450 1 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01298 440 Gene3D Cytochrome P450 1 438 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01298 440 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01298 440 PRINTS P450 superfamily signature 369 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01298 440 PRINTS P450 superfamily signature 244 261 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01298 440 PRINTS P450 superfamily signature 297 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01298 440 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 371 380 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01298 Vimu-Chr9 21097614 21099884 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01298 6 434 Cytochrome P450 AT4G37370 54.419 3.37e-177 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01298 K13260 - gmx:100811727 676.781