Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01271 ATGGTCTGTGAATGCATGGATAATTTGCTCTGTGATGAGGTGTGGCTTTCAAATTCTGAAAACACCTTTGAAGAAGAAGTTGGTGATTTTGTTTCCCTCAAGAGTTATGAAAACAAAGAGTTTGAAGAGACTTTTGCACTGTATCTAGAGAAGGAGGCTTCTTCTTTGACAGAACAAGACTATGCAAAATACTTGCAGTCCAACAATTTGTTTGTTCCTAGGTGTAGAGTTATTCAATGGCTTCTCAAGTGTGGAAGTCACTTTAATCTTTCATTTGGGACAGTTTTCTTGGCTGTTAATTATCTTGATCGCTTTGTATCCATTTGTCAAAGCAATGATTGGAAATACTGGATGCTTGAATTGCTTTCTATTTCTTGCTTATCAGTTGCCATAAAGTTCAATGAGAAATCAACACTTTCCATGGATGAAATTCAGGTGGAGGGCTTGAATTACTCATTCGAATCAAGTGTAATTTTGAAGATGGAGTTGATCCTATTGAAGGCATTGGGGTGGCACCTTAACTCTGTGACAAGTTATTCTTTTCTGGAAATTGTGGATAGTGATTTCTTGGAATCTCATCTTTATCATAAGTTTATTTCACCTGCCACTGAACTCCTTCTCCAAGCTACTTTAGATCAGAAAATGCTGGAATTCAGGCCAAGCATTATTGGCATATCTGCATTGTGGTGCACTCTTGAACACTTATTTCCTCAAACATCAGATACTTACATTGCTTACATTATGAGACTCTTGAACCAAAGTCAGAAGGATGATATGATAAAGTGTCATGAGTTGATGCAAAGACAGAGTTCATTCTGGTGTGAAAATCAGCGCCATTGCCCTTTAAGCCCAACAACAGTACTGTTGAACACATAA 876 0.3756 MVCECMDNLLCDEVWLSNSENTFEEEVGDFVSLKSYENKEFEETFALYLEKEASSLTEQDYAKYLQSNNLFVPRCRVIQWLLKCGSHFNLSFGTVFLAVNYLDRFVSICQSNDWKYWMLELLSISCLSVAIKFNEKSTLSMDEIQVEGLNYSFESSVILKMELILLKALGWHLNSVTSYSFLEIVDSDFLESHLYHKFISPATELLLQATLDQKMLEFRPSIIGISALWCTLEHLFPQTSDTYIAYIMRLLNQSQKDDMIKCHELMQRQSSFWCENQRHCPLSPTTVLLNT 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01271 291 ProSitePatterns Cyclins signature. 74 105 IPR006671 -
Vimu9g01271 291 Pfam Cyclin, N-terminal domain 45 174 IPR006671 -
Vimu9g01271 291 SUPERFAMILY Cyclin-like 41 174 IPR036915 -
Vimu9g01271 291 SMART cyclin_7 79 167 IPR013763 -
Vimu9g01271 291 Gene3D - 58 174 - -
Vimu9g01271 291 PANTHER CYCLINS 39 268 IPR039361 -
Vimu9g01271 291 CDD CYCLIN_AtCycD-like_rpt2 176 266 - -
Vimu9g01271 291 Pfam Cyclin, C-terminal domain 176 270 IPR004367 -
Vimu9g01271 291 Gene3D - 49 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01271 Vimu-Chr9 20716387 20719868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01271 43 278 Core Cell Cycle Gene Families AT1G70210 30.833 2.62e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01271 K18813 - gmx:100792420 369.007