Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01261 ATGCATGGGAATCAAAGCCATCCATCAATAGCAGAAGCAAAACTTTCAAGCATGGCTCTGTTGTATTTTGCTTTGCTCATTCTCTTCTTTCTCTTTTCTCTTAAGCTCTTATTTCAAACAAGAAGATTTAGAAACCTTCCTCCAGGCCCAATTTCTTACCCTATAATCGGAAACCTCTTCCAACTCAAACAGCCTTTCCATCGCACATTCACTCAAATGTCGCAAAAATACGGTCCAGTCTTCTCTCTCTGGTTCGGTTCCCGACTCGTTGTCGTCCTTACTTCACAATCCGCCGTGCAAGAATGCTTCGCCAAAAACGACATCGTCTTGGCCAACCGACCTCACTTTCTCTTTGGCAAATACATCAGCTACAATAACAGCACCATCCTTCACTCTTCCTACGGCGATCACTGGCGCCACCTCCGTCGCATCTTGTCGCTGGAGGTTGTCTCAACGAACCGTTTAAACTCTTTCTACGAGGTCCGAAGGGACGAGATCATGAGGCTGCTGCAAAAGCTCGCTAACCTCTCATCCAACCACTTCACGAAAGTGGATCTAAAAACCATGTTTATGGAGACATCATTTAACACTATGATGAGAATAGTGTCTGGAAAAAGACTCTTTGGTGATGATTGTGATGTGAACGATGTCGAGAAAGCAAAAGAATTCAAAGAAATCATCAAAGAGTTAGTGATATTAGCAGGAGTCAATAATCGAGGAGACTTCTTGCCTTTCGTGAGATGGTTTGATTTTGATAATTTGGAGAAGAAGCTAAAAGGGATTGGTAAGAGAACTGATGCATTCTTACAAGAACTCATCGAAGAGCATCGTAATGGAAAAAACAATGGAAATACTATGATAGATCATCTCCTTGCTTTACAACGATCACAACCTGAACAATACACCGACCAAATCATCAAAGGACTTTCTCTGAGCTTACTACTTGCCGGAACAGATACATCAGCTTTAACTTTAGAATGGACAATGGCAAATTTATTGAACCATCCAGAAGTTATAAAGAAGGCAAAAAAGGAAATAGACACTCATGTAGGATCAAATCGTCTTGTAGAGGAATCTGACATGGCAAAACTCCCTTACATTCAATGCATTGTTTATGAGACACTTCGATTGCATCCTGCTGCTCCAATTTGGTCACCACATTTGTCTTCAGAAGATTGTATCGTAGGAAACTATAATCTCCCAAAAGACACAATTGTGTTGGTGAATGCTTGGGCTGCTCATATGGATCCAAAAATGTGGAGTGACCCAACACACTTTAAGCCTGAAAGGTTTGAGAATGAAAATGAAGTAAATAGGTTACTTTCATTTGGGTTAGGGCGGAGGGCTTGTCCTGGATCAAACCTGGCACAACGCACAGTTGGCTTATCCATAGCATTATTACTTCAATGTTTTGAGTGGGAACGAATTGGTAAGGAAGAAATTGATATGTCTGAAGCAAATGGAATTACTATTTCAAGAAAAAATCCATTGGAAGCTATGTGCCAACTCCGTCAGTCACTAACAGTTAAGGATGTGTACTGA 1542 0.4105 MHGNQSHPSIAEAKLSSMALLYFALLILFFLFSLKLLFQTRRFRNLPPGPISYPIIGNLFQLKQPFHRTFTQMSQKYGPVFSLWFGSRLVVVLTSQSAVQECFAKNDIVLANRPHFLFGKYISYNNSTILHSSYGDHWRHLRRILSLEVVSTNRLNSFYEVRRDEIMRLLQKLANLSSNHFTKVDLKTMFMETSFNTMMRIVSGKRLFGDDCDVNDVEKAKEFKEIIKELVILAGVNNRGDFLPFVRWFDFDNLEKKLKGIGKRTDAFLQELIEEHRNGKNNGNTMIDHLLALQRSQPEQYTDQIIKGLSLSLLLAGTDTSALTLEWTMANLLNHPEVIKKAKKEIDTHVGSNRLVEESDMAKLPYIQCIVYETLRLHPAAPIWSPHLSSEDCIVGNYNLPKDTIVLVNAWAAHMDPKMWSDPTHFKPERFENENEVNRLLSFGLGRRACPGSNLAQRTVGLSIALLLQCFEWERIGKEEIDMSEANGITISRKNPLEAMCQLRQSLTVKDVY 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01261 513 SUPERFAMILY Cytochrome P450 47 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01261 513 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01261 513 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01261 513 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01261 513 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01261 513 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01261 513 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01261 513 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01261 513 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01261 513 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01261 513 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01261 513 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01261 513 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01261 513 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01261 513 CDD CYP81 78 497 - -
Vimu9g01261 513 FunFam Cytochrome P450 family protein 38 507 - -
Vimu9g01261 513 PANTHER CYTOCHROME P450 82C3-RELATED 26 505 - -
Vimu9g01261 513 Pfam Cytochrome P450 47 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01261 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Vimu9g01261 513 Gene3D Cytochrome P450 39 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01261 Vimu-Chr9 20518010 20520513 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01261 27 508 Cytochrome P450 AT4G37370 52.977 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01261 K13260 - gmx:100811727 742.651