Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01260 ATGGCAGAGTTGCTACACAATCTTGAAAAACTATCAAAAACAAAAAAGGAACTTGAACAAGTTTTTAGTGAAAGTTGGTTCGAAACTGAAGATTCAACTCTATCTAAGCTCACTTACCTACAAGCCGTTGTGAAGGAAACGCTTATAGCTGAAGTAGATATATGTGGCTTTCAGGTTCCCGAAGATGCACAAGTTCCTTTTAATGTATGGAGCATGGGGCGAGATTCAAGCATCTGGACAGACCCAAATTCATTTGTACCTGAAAGATTTTTAGAGAAGGAAGATTTCAAAGGAGAAGATCATGGTTTCATTCCTTTTGGATCTGGTAGAAGAATGTGCCCTGGTGTTGCACTGGCTAATAGAATTGTTCATACCATTTTGGCTTCACTTCTGTACCATTTTGATTGA 408 0.3848 MAELLHNLEKLSKTKKELEQVFSESWFETEDSTLSKLTYLQAVVKETLIAEVDICGFQVPEDAQVPFNVWSMGRDSSIWTDPNSFVPERFLEKEDFKGEDHGFIPFGSGRRMCPGVALANRIVHTILASLLYHFD 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01260 135 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 106 115 IPR017972 GO:0005506|GO:0016705
Vimu9g01260 135 PRINTS E-class P450 group I signature 113 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01260 135 PRINTS E-class P450 group I signature 68 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01260 135 PRINTS E-class P450 group I signature 103 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01260 135 Coils Coil 1 21 - -
Vimu9g01260 135 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 135 - -
Vimu9g01260 135 Pfam Cytochrome P450 51 135 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01260 135 Gene3D Cytochrome P450 1 48 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01260 135 Gene3D Cytochrome P450 49 135 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01260 135 SUPERFAMILY Cytochrome P450 1 135 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01260 Vimu-Chr9 20510026 20510472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01260 1 135 Cytochrome P450 AT1G33730 44.667 9.29e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01260 - - pvu:PHAVU_010G012700g 212.616