Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01259 ATGACACCATGTTCTTCAGTGGTAAATGACTCTCTAAGAAGAAAGTTAATTGTATGGAAAGAGATGTCAAAAAAGAGGAGCAGACATCATAGAAGTTCAACCTGTCCTACTTCTGCAATAAGCATGAACGACAACTTGTTAACAACATTTGTGCAAGATCCTGTCTCTCCTTTGGTCTATCACCTTGATAAACAACATGTGTATGCCACAAAAACGAAGTTAACTAGGTCTGTGTCATTTCCTCTACCTGACCCCTCATCAAAAAGAGAAAAATTTGAGGCTGTAGGGAACGGTTTTTCACCGGAAGGGAAAGGAAAATCATGTTTTGAAAGCAAAACACCAAAGTCAGTTCAATTTGAATCCTCGAAAAAGTTTTACCTAAGGTCCTTGTCTCAAAGTTTCAATGTAAATGAAGCAATGATTACAAGAGATGTTACTAATTCTTCACCTCAGGATCATAGTCTCAACGAAATCAAACATTTTAAGAATCTGAAACAGAAAATAAAGCATGTTATAGGAGAAAGTAGAAAAGAAAAGCTTCGAGTAGCTATGGATGCTATTATTGATAAACTTCCTCAAGGCCATGGGATATCGAATAATTTGAAGAAAGAAGTTTTTAAGAAAATGACAGATTCTAATGATAGTAGAGAAGGTGAAAACAGTCATGGAAGATATAATGAGAGTGATCGTGTTACTAGTTCATTTGCCAAGCATCACTGGAACATCATAAGAAGAAAATTGTCTCTTGAAGAACCACTAGACAATTATTTTCGCTCCCATGAAAAGGGCTTTAATTCAGAAAAAATTCACCTCCAATCCAAGCAGCTAAAATTAAGAACAGAAAAGGGACATTCACCATTGAAGATGCTGGTACAAAGGATGCTTTCATTGCCTGATCTCAATGCCTTGTCCTATCCTTATCAGAATAAGGACTTCCCTGATATTTCATCTGTGACTGAGCCAAAGCCAAAAGTAGCTTCTGGGGATGGAACATTGAGTTCAGACAACATTTTCAATCAGAAAAAGAGGCCGGGCCTTAATTTACATTCAAAAATTCGGCTTCAATCAGAGACACCTGTAGAAGATTTGATTCAGAAACACCCTGACAGTGTGGATGAAAATGATCAAGAGATTAGTAATATTGTTGAACAAGGATCAGAGTGCAGCAATGGCAAGGCTGGTGTGGCAACTGATGATTTTGGACATAGTTGTTTTAAAAGTGGTAACACCTCTGATGACCAAGAAATGATTGAGCCCATAAAAGAAAACATGACTGCAATAGAAGAATCAGTGGATTCAAAATTGATTACGGAACCTGGCATTGAGCTAGAAAACATTATTGAGCAACAAGAGGCTACCATGGATTCACTCAAAGTGCAAGACACCATAGAGAATGCTCAAAAAGTGGAGATTCAAAGCAAGAACTTGAACTATGACATTACTTTTTCTCATATCCCCATCAAAGACAAAGCTGAGTTTAACTACGTGAAATTTGTACTTGAGATATCTGGACTGACTGGTAAAGAGTGCCTTTCTGCATGGCATTCAAGTGACCACCCAGTTGATCCACTACTCTATGAAGAAATGGAGAATGACCTTGATTTCTGCACTTATGGGGGCAGTGGCCAGTGCAATCACCATGTGTTGTTTGACCTAATCAATGAGACATTGTTGGAACTTTCTGGGAGGTGTCACTGCTGCTGTTCCATACCTTTTTCATCTTCTCATCCAATGCCAAAAGGGTGTCACACTCTTCATCAAGTGTGGACTCATATGAACAAGTCCTTGTGCCTCAGATCCAAAACTGGGCTAACCATAGATGACCATGTAAGTCGTGATCTAGAAAGGCGTGATGGGTGGGTGAACCCTAAATTGTATGCACAGTGTGTCAGTTTGGAGCTTGAAGACTTTATTTTGCATGATCTTCTGGAGGAAATATCATGTGACTTAGCATGCATTTAA 1962 0.3863 MTPCSSVVNDSLRRKLIVWKEMSKKRSRHHRSSTCPTSAISMNDNLLTTFVQDPVSPLVYHLDKQHVYATKTKLTRSVSFPLPDPSSKREKFEAVGNGFSPEGKGKSCFESKTPKSVQFESSKKFYLRSLSQSFNVNEAMITRDVTNSSPQDHSLNEIKHFKNLKQKIKHVIGESRKEKLRVAMDAIIDKLPQGHGISNNLKKEVFKKMTDSNDSREGENSHGRYNESDRVTSSFAKHHWNIIRRKLSLEEPLDNYFRSHEKGFNSEKIHLQSKQLKLRTEKGHSPLKMLVQRMLSLPDLNALSYPYQNKDFPDISSVTEPKPKVASGDGTLSSDNIFNQKKRPGLNLHSKIRLQSETPVEDLIQKHPDSVDENDQEISNIVEQGSECSNGKAGVATDDFGHSCFKSGNTSDDQEMIEPIKENMTAIEESVDSKLITEPGIELENIIEQQEATMDSLKVQDTIENAQKVEIQSKNLNYDITFSHIPIKDKAEFNYVKFVLEISGLTGKECLSAWHSSDHPVDPLLYEEMENDLDFCTYGGSGQCNHHVLFDLINETLLELSGRCHCCCSIPFSSSHPMPKGCHTLHQVWTHMNKSLCLRSKTGLTIDDHVSRDLERRDGWVNPKLYAQCVSLELEDFILHDLLEEISCDLACI 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01259 653 Pfam Domain of unknown function (DUF4378) 492 645 IPR025486 -
Vimu9g01259 653 MobiDBLite consensus disorder prediction 209 230 - -
Vimu9g01259 653 MobiDBLite consensus disorder prediction 314 342 - -
Vimu9g01259 653 PANTHER PROTEIN TRM32 40 650 IPR044257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01259 Vimu-Chr9 20490526 20492653 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01259 442 639 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 35.426 2.04e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01259 - - gmx:121174644 855.514