Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01209 ATGTTCATTTTCCTCCTCACTCTTCTACTGTTCTTCGTGTTTCTCCTTAGTTTCTTCATCGGAAAACAATATGGTTATCACCGTAACTATACACCTCCTTCACACCCTATCATTGGATGCCTCGTTTCTTTCTACCAGAACCGCCACCGTCTCCTGGACTGGTACACCGAACACATAGCACAATCCCCGACCCACACCATCGTCGTTCATCGGCTCGGCGCACGTCGCACGGTGGTAACGGCGAACCCCCGCAACGTAGAGTACATTCTGAAGACCAACTTCGGAAACTTCCCCAAAGGCAAACCCTTCACCGAAATCCTTGGAGACCTTCTCGGGTGCGGGATTTTCAACGTCGATGGCGAGCTCTGGCAAGTGCAGCGCAAGCTAGCGAGCCACGAGTTCAGTACGCGCTCCCTTAAGGACTTCATCGTGAAAACGCTGCAGGAAGAGGTCCAACACAGGCTTATTCCACTACTTGAGCAGACATCACGTGAGAAGCACGTGATCGACCTGCAGGACGTGCTGCGGAGACTTACGTCCGACACGGTGTGTAAGGTGTCGTTAGGCTACGACCCGTATTGCCTGGACCTGGAAAAGCCGCTGCCCCCTCTTCTCACAGCTTTCGACACCGCCTCGGAAGTGAGCGCCGCACGCGGCGCGGCGCCAGTGTTTCTGCTGTGGAAGATGAAGAGAATGCTGAACATGGGGTCAGAAAAGGCTCTGAAAGAAGCCGTGAAGCTGGTGCATGAGTCGGTTATGAAGATCATAAAAGCAAAGAAAGATGAAATGACATATAATGGAAAAAAAGGTGGCACCGATTTGCTGGAACGGTTGTTGGAGGCAGGGCAAGAGGAGACGGTGGTGAGGGATATGGTAATAAGCATGATAATGGCGGGGAGAGACACGACGTCGGCGGCGATGACGTGGCTGTTCTGGTTGTTATCGAAGCATCGAGAGGAAGAAGCGTTACTAGTGAAAGAGGTTTATGGTGGAAATAAGCAATGTGAGGGTTTGGATTATGAGTGTTTGAAAGAGATGAAGTTGTTGAAGGCGTGTTTGTGTGAGTCGATGAGGCTGTATCCGCCGGTGGCGTGGGACTCGAAGCATGCAAGTGGTGCTGATGTGTTACCTGACGGAACCCACGTGGGGAAAGGGGAAAGGGTGACATATTTTCCATACGGGATGGGGAGAATGGAATCTCTGTGGGGGAAGGATTGCTATGAGTTTAAACCAGAACGATGGTTTGATGAAGAGAATGTTGAAAATGGGGTTCTGAAGTGTGTGAATCCGTATAAGTTTCCGGTTTTTCAGGCGGGTCCAAGAGTTTGTCTTGGGAGGGAAATGGCTTTTATTCAGATGGAGTATGTGGTGGCTTCTATCCTTAATCGTTTTGTCATCTCGCCGGTCTCCGATGAGCAGCCGCGCTTTGTTCCTCTTTTAACAGCTCATATGGCTGGAGGATTCAAAGTGAGGATCAACAGCAGAACTGGAGCAGGAACTGAGTGA 1506 0.506 MFIFLLTLLLFFVFLLSFFIGKQYGYHRNYTPPSHPIIGCLVSFYQNRHRLLDWYTEHIAQSPTHTIVVHRLGARRTVVTANPRNVEYILKTNFGNFPKGKPFTEILGDLLGCGIFNVDGELWQVQRKLASHEFSTRSLKDFIVKTLQEEVQHRLIPLLEQTSREKHVIDLQDVLRRLTSDTVCKVSLGYDPYCLDLEKPLPPLLTAFDTASEVSAARGAAPVFLLWKMKRMLNMGSEKALKEAVKLVHESVMKIIKAKKDEMTYNGKKGGTDLLERLLEAGQEETVVRDMVISMIMAGRDTTSAAMTWLFWLLSKHREEEALLVKEVYGGNKQCEGLDYECLKEMKLLKACLCESMRLYPPVAWDSKHASGADVLPDGTHVGKGERVTYFPYGMGRMESLWGKDCYEFKPERWFDEENVENGVLKCVNPYKFPVFQAGPRVCLGREMAFIQMEYVVASILNRFVISPVSDEQPRFVPLLTAHMAGGFKVRINSRTGAGTE 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01209 501 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01209 501 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01209 501 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01209 501 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01209 501 FunFam Cytochrome P450 23 498 - -
Vimu9g01209 501 Gene3D Cytochrome P450 26 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01209 501 PRINTS E-class P450 group IV signature 346 362 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01209 501 PRINTS E-class P450 group IV signature 443 461 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01209 501 PRINTS E-class P450 group IV signature 289 315 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01209 501 PANTHER CYTOCHROME P450 18 490 - -
Vimu9g01209 501 CDD CYP86A 66 488 - -
Vimu9g01209 501 SUPERFAMILY Cytochrome P450 31 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01209 501 Pfam Cytochrome P450 32 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01209 Vimu-Chr9 19832037 19833659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01209 4 496 Cytochrome P450 AT3G48520 59.192 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01209 K20665 - gmx:100797785 837.41