Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01165 TCACAAACTGGTTTCTTCCACCTCATTGTTATAGAAACAATGTTGTCCTCACTTCTAATTCTCTGCATTACTCTTCCTGTGTTTTTCTCATTCTTCCTCAAATACCTCAAAACCATGAAAAACCCATCACTCCCACCAGGTCCTAGAGGCCTTCCCATAATAGGGAACCTTCATCAGCTCAATAACTCTACTCTTTATCTTCAGCTATGGCAACTCTCAAGAAAATATGGACCAATATTTTCCCTTAAATTAGGTTTAAGGTCAGCCATCGTTGTTTCCTCTCCTAAACTTGCCAAAGAGGTAATGAAAGATCATGACCTTGAGTTTTGTGGGAGACCTAGATTACTTGGCCAACAGAAATTGTCTTATAATGGAATTGACATTGCATTTTGCCCATACAATAGTTATTGGAGAGAAATAAGGAAAATCTGTGTTGTTCATCTCCTTAGCTCCATTCGTGTGTCAAACCTTTCCTCAATAAGACACTTTGAGGTCAAGCAAATGATAAGAAAAATATCCATGCATGCATCGTCCTCCAAGGTTACCAATTTGAGTGATGCACTCATGTCCCTCACCAGCACTATTATATGCAGAATTGCCTTTGGGAGAAGATATGAAGATGAAGGAACAGAAAGGAGTAGATTCCATGAGCTACTGAATGAGTGTCAAGCCATGATGGGCATGTTTTTTTTCTCAGATTATATTCCTTTCTTGGGTTGGATTGATAGAATCACAGGGCTACGTGCTCGTCTTGAACAGAATTTCAAAGAGTTGGATACGTTCTACCAAGAAGTCATTGATGAACACATGGATCCTAATAGAAAGACACCAGAAAACGAGGATTTGATTGATGTCTTACTTCAACTCAAAAAGCAACGTTCGTTTTCTGTAGATCTAGAAAATGATCACATCAAAGCTGTTTTCATGAACATGCTTGTAGCAGCAACTGATACAACTGCTGCTACGACGATCTGGGCTATGACCTTACTACTAAAAAATCCAAGAGTAATGAAGAAAGTTCAAGAAGAAATTAGGAATTTGGCGGGTGAAAAAGATTTTCTGTACGAAGATGATATTCAAAAGCTCCCCTATTTCAAGGCCGTGATAAAAGAGACACTGAGACTGCATCTACCAGCTCCCCTACTTGTGCATAGGGAAACAAATGAAGCATGTATTTTAGAGGGCTATGAAATTCCAGCCAAGACATTAGTGTATGTGAATGCTTGGACTATCCATAGAGATCCTAACTCTTGGAAAGACCCAGATGAGTTTTTACCAGAGAGGTTCTTAGATAATACAATAGATTTTCGAGGGCAAGATTTTGAGTTCATTCCATTTGGTGCTGGACGTAGAATTTGCCCTGGTATGATTATGGCAATTGCTTCATTGGATCTTATTCTAGCAAATCTTCTCAGGTCATTTGATTGGGAATTACCAGTTGGAATGAAGAAGGAAGATATTGATACTGAAGTGTTGCCTGGAATTACTCAACACAAGAAGAATCCTCTATGTGTTTTGGCTAAGGTTCGAATCTAG 1536 0.3893 SQTGFFHLIVIETMLSSLLILCITLPVFFSFFLKYLKTMKNPSLPPGPRGLPIIGNLHQLNNSTLYLQLWQLSRKYGPIFSLKLGLRSAIVVSSPKLAKEVMKDHDLEFCGRPRLLGQQKLSYNGIDIAFCPYNSYWREIRKICVVHLLSSIRVSNLSSIRHFEVKQMIRKISMHASSSKVTNLSDALMSLTSTIICRIAFGRRYEDEGTERSRFHELLNECQAMMGMFFFSDYIPFLGWIDRITGLRARLEQNFKELDTFYQEVIDEHMDPNRKTPENEDLIDVLLQLKKQRSFSVDLENDHIKAVFMNMLVAATDTTAATTIWAMTLLLKNPRVMKKVQEEIRNLAGEKDFLYEDDIQKLPYFKAVIKETLRLHLPAPLLVHRETNEACILEGYEIPAKTLVYVNAWTIHRDPNSWKDPDEFLPERFLDNTIDFRGQDFEFIPFGAGRRICPGMIMAIASLDLILANLLRSFDWELPVGMKKEDIDTEVLPGITQHKKNPLCVLAKVRI 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01165 511 CDD CYP71-like 75 503 - -
Vimu9g01165 511 SUPERFAMILY Cytochrome P450 45 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01165 511 FunFam Cytochrome P450 83B1 31 506 - -
Vimu9g01165 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Vimu9g01165 511 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01165 511 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01165 511 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01165 511 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01165 511 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01165 511 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01165 511 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01165 511 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01165 511 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01165 511 PANTHER CYTOCHROME P450 71B11-RELATED 25 507 - -
Vimu9g01165 511 Pfam Cytochrome P450 45 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01165 511 Coils Coil 337 357 - -
Vimu9g01165 511 Gene3D Cytochrome P450 37 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01165 511 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01165 511 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01165 511 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g01165 511 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01165 Vimu-Chr9 19292395 19294793 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01165 18 510 Cytochrome P450 AT4G31500 47.984 1.36e-174 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01165 - - gmx:100801312 799.275