Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01156 ATGATTTTTCTTGTTGCATCTTTGTTCTTATGTCCTAGAAGTACTCTTTCTTGTAGATCTAGGTTCATTCCTGAGTCACTGGAATCTAAGGATTCCATACCCCACGGTGATTCCTTTACTTCTAGTAGAATAAATCCTTGCTTTACCTCTCAAGAATTTCCTCGCCTTACACACCCTCTAAATCTTGTGGAGCCTCTAGCAAGATTTGAGATTAGTCTTCCAACTCAATCCAAACAGTCGCAACCGGAATCGCGACGGGACGACGATCCAAAAAAGAAACGAAGCTTGCGCGAAGTCATTAGCGGAGAGGATATAGACTCCATTAGGGCTTTGGAGCTTTGTCATTGGAGTTTGGACAAGAATCGCGAAGTTGTTCTACGTGTTCGTCAAGTGGTTCGAGTGGAATTTACTGGAAGGTTATATAGGGATGCTTTTTTGAATGTGGGCTTGGGGTTGTTTGAAAATGTGGATGAAGCACCATTAAACTGGTTTGACAAAATGAAAATACTAGTTGGTGCTTCAAAAGGGCTAGAGTACTTACACGAGAGTTCAGACCCTCCAGTTATATTCAAGGATTTGAAAGCGTCGAGCATCTTGGTGGACAATGATTTCAAAGTTAAACTACGTGATGTTGGAATGGCCAAGCTTTCTGGTGGAGAAAAGATGAACAACAGACCTCCAAGACTTATGGGGAACAATGGTTACTGCGCTTCGGAGTATGTAAAGACAGGTCAAGGAAACTACAAGAAAACGAGAACAGACTCCTCCACACCTTTGGCCTTTGAGAAGAGATGGAAACAATCAAAACGTGAGAGAAGAAAGCAACCAGAGAGAAGGAAGAAGTATGGAAAAATTTCAGTGTATACTCATTTGGGTAATAGGGCCAACGCAGAACTTATGGCCTAA 906 0.4205 MIFLVASLFLCPRSTLSCRSRFIPESLESKDSIPHGDSFTSSRINPCFTSQEFPRLTHPLNLVEPLARFEISLPTQSKQSQPESRRDDDPKKKRSLREVISGEDIDSIRALELCHWSLDKNREVVLRVRQVVRVEFTGRLYRDAFLNVGLGLFENVDEAPLNWFDKMKILVGASKGLEYLHESSDPPVIFKDLKASSILVDNDFKVKLRDVGMAKLSGGEKMNNRPPRLMGNNGYCASEYVKTGQGNYKKTRTDSSTPLAFEKRWKQSKRERRKQPERRKKYGKISVYTHLGNRANAELMA 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01156 301 MobiDBLite consensus disorder prediction 74 96 - -
Vimu9g01156 301 MobiDBLite consensus disorder prediction 247 287 - -
Vimu9g01156 301 ProSiteProfiles Protein kinase domain profile. 27 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu9g01156 301 PANTHER OS07G0668900 PROTEIN 156 249 - -
Vimu9g01156 301 Gene3D Transferase(Phosphotransferase) domain 1 150 255 - -
Vimu9g01156 301 Pfam Protein kinase domain 168 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu9g01156 301 SUPERFAMILY Protein kinase-like (PK-like) 152 245 IPR011009 -
Vimu9g01156 301 MobiDBLite consensus disorder prediction 81 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01156 Vimu-Chr9 19149929 19154919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01156 157 245 Glycoside Hydrolase AT3G07070 49.438 1.19e-24 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Vimu9g01156 Pkinase 8.8e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01156 - - vum:124829893 166.777