Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01125 ATGGAGATTACTAATGCGATAGAACTCCACATGGAACATTGGAGGGACGCATTTTCTGAGGAAGCTGATACCATCTTTGATTCCAATTATATAGGTTCTGGATTGCGGACGGTTCATTCTGAGATAAGGTTGCTCAAGCTTCATTGGCAGGAGAAAGTTCTTAAGGCTTATGGTAACGAACTATATTGCAGGAGAACAAGTGACATAGAACGCCACTTGGAGCATTGCGCTAGTGCACTTATTGAGGCTACTGACATCTCAACAGCTTTTCAATCAAGTTTTCAAAAGCTGCAGGCTTACAATCGGATAGAGAGCCTTGTAGAATATTGGAGGGCTGCACTCTGTGAGACTGCTGAAATTTTGAGGTTGGTAGTCCAGCACTACAGAGGAATAACGGATAATGAGATCAACTACATCGAGAAGCATGCTAGGGACGCACTTCGTGAGGCTGCTGGCATCTCCGGGGTTGTAATCCTCAATTCTAGGAGTGAAAGTGAAGCTGTGAAAAATATTGTTAAAAATGTTACAAGTTTGTTGGACAAGACAGAGTTGTTTGTTGCCCATAATCCTGTCGGAGTAGAATCTCGAGTGCAAGAAATGGTTCAATTGCTACAACAAAAACAATCAAACGATGTACTACTACTTGGGGTATGGGGGATGGGAGGCATCGGTAAAACAACTATTGCAAGAGCAATTTACAATAAGATTGGGCGAAATTTTGAGGGAAGGAGTTTCCTTGCAGATATTAGAGAGGTTTGGGGGCAAGAAGCTGGCCACGTTTGTTTACAAGAACAACTTCTATTTGATATCCACAAAGAAAACAATACAAAGATACATAACATTGAGTCAGGAAAAGTTATACTAAGAGAAAGACTTCGCCATAAAAAGATACTTCTTATACTTGATGATGTAAATAAGTTACAGCAATTAAATGCTTTGTGTGGAAATCGTGAATGGTTTGGTTCAGGGAGTAGAATAATCATCACAACCAGAGACATACATTTACTTAGAGGGCAAAGAGTTGATCAAGTTTTTGCAATGACAGGAATGAATGTAGATGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAACAAGCAAGTCCCAAAGAAGAATTTATTGAACTTTCAAGAAACGTAGTTGCTTATGCTGGGGGCTTGCCACTTGCTCTTCAAGTCCTTGGGTCTTATTTGTTTGATATGGAGGTAACACAATGGAAGAGTGTATTGGAAAAACTTAGGAAAATTCCTAATGATGAAGTACAGGAGAAGTTAAAAATAAGCTATGATGGTTTAAGTGATGATACTGAGAAAGGAATATTCCTTGATATAGCATGTTTCTTTATAGGAAAGGATCGAAATGATGTTATACATATATTGAATGGTTGTGGACTTTTCGCTGAAAATGGAATACGTGTCTTGGTGGAGCGAAGTCTTGTAACTGTGGATGATAGGAACCAACTTGGAATGCATGATTTGCTACGGGATATGGGAAGGGAAATTGTTCGTTCAAAATCTCCAATGGAGCTTGAGGAGCGTAGCAGGTTATGGTTTCATGAGGATGTGCTTGATGTGTTATCAAAAGAAACTGGAACAAAATTTATTGAAGGATTGACTTTGAAGTTACCTAGAACTAATACAAAATCTCTGCGCACTAAAGCATTTATGAACATGAAGAAACTCAGGTTGCTGCAACTATCTGGTGTAGAACTTGTTGGAGATTTTGAATATCTTTCCAAAGACCTGAGATGGCTTTGTTGGCATGGATTTCCTTTTGCCTTCATACCAACAAGCTTTTATCAAGGAAGTCTAGTTTCTATTGAGTTAGAAAATAGTAAGATTACCATGGTGTGGAAAGCGACTCAGCTGATGGAGAAGTTGAAAATTATTAATCTTAGCCATTCTCATTATTTAACAAAGACACCAGACTTTTTGAATTTGCCTAATCTTGAAAAGCTTATACTCATGGATTGTCCAAGGCTGTCTGAAGTTTCATATACCATTGGTCATCTCACCAAAATTGATAAGTTGGAAGAAGACCTAGAACAGATGGAGTCTTTGACAACCCTTGTTGCTGACAGGACTGCTATAAGAAGGGTGCCCTTTTCAATAGTCAGATCTAAAAGTATTGGATATATTTCATTATGTGGTTATGAAGGATTTTCACGCAATGTGTTTCCCTCTATCATTTGGTCTTGGATGTCACCAGTAAATAGTCTCTCTTCTCGTGTTCAAACATTGGTGGACATGGCTTCTCTTGTTTCTTTAGATATACAAAATAGCAGTTCCAATCAGCTATCATATATATCTGAGGAACTTCCAAAGCTTCAAAGTCTTTGGATAGAGTGTGGTTCGGATCTTCAACTTTCTCGAGATACAACGAGTATTTTGGATGCTTTAAATGCGAGAAATTCTGAAGAATCTGAGTCATCTGGAACAACATCACAAAATATAACTACGAGTGATGGTGGTGATTGTTTGGTACCTGGCGATTGTTATCCAGATTGGTTAACCTTCAGCAGCGAAGGTTCTTCTGTGACTTTTGAAATTCCTCAAGTGAATGGGCGTAGCTTAAAGACAATGATGTGCCATATCCATTATTCTTCCTCAGACAGTATAACATCAGACGGCCTGAAAAATTTGTTGGTGATAAATCACACAAAGAGCACCATTCAGCTTTATAAGAGAAATGCATTAGCGTCGTTTGATGATGAGGAGTGGCAGAGGGTACTATCAAATATTGAGCCTGGAAACAAGGTGCAAATTGTTGTTGTTTTCTGGAGCAGAATAACTGTTAACAAGACATCAATTTATCTTATATATGAGGCAATTGATGAAAAAGTAGAGCACTATCATGCACCAAATATGAATGTTCCTAGGTCGATCTTTCCCGCAGTGGAATCCATGGAGGACATGAGGGCGTCACCACCAGAATCGACGTTTATACGGGTGATGTTAATGGACGTCGGTTTTTTGCAGGTGCAACGTCGATATAGACGTCGGTTCCGTTCAAAGAATGGCGTCTACAAAGACATCAGACATTGCGTTAACCGACGTCCTTAG 3063 0.3905 MEITNAIELHMEHWRDAFSEEADTIFDSNYIGSGLRTVHSEIRLLKLHWQEKVLKAYGNELYCRRTSDIERHLEHCASALIEATDISTAFQSSFQKLQAYNRIESLVEYWRAALCETAEILRLVVQHYRGITDNEINYIEKHARDALREAAGISGVVILNSRSESEAVKNIVKNVTSLLDKTELFVAHNPVGVESRVQEMVQLLQQKQSNDVLLLGVWGMGGIGKTTIARAIYNKIGRNFEGRSFLADIREVWGQEAGHVCLQEQLLFDIHKENNTKIHNIESGKVILRERLRHKKILLILDDVNKLQQLNALCGNREWFGSGSRIIITTRDIHLLRGQRVDQVFAMTGMNVDESIELFSWHAFKQASPKEEFIELSRNVVAYAGGLPLALQVLGSYLFDMEVTQWKSVLEKLRKIPNDEVQEKLKISYDGLSDDTEKGIFLDIACFFIGKDRNDVIHILNGCGLFAENGIRVLVERSLVTVDDRNQLGMHDLLRDMGREIVRSKSPMELEERSRLWFHEDVLDVLSKETGTKFIEGLTLKLPRTNTKSLRTKAFMNMKKLRLLQLSGVELVGDFEYLSKDLRWLCWHGFPFAFIPTSFYQGSLVSIELENSKITMVWKATQLMEKLKIINLSHSHYLTKTPDFLNLPNLEKLILMDCPRLSEVSYTIGHLTKIDKLEEDLEQMESLTTLVADRTAIRRVPFSIVRSKSIGYISLCGYEGFSRNVFPSIIWSWMSPVNSLSSRVQTLVDMASLVSLDIQNSSSNQLSYISEELPKLQSLWIECGSDLQLSRDTTSILDALNARNSEESESSGTTSQNITTSDGGDCLVPGDCYPDWLTFSSEGSSVTFEIPQVNGRSLKTMMCHIHYSSSDSITSDGLKNLLVINHTKSTIQLYKRNALASFDDEEWQRVLSNIEPGNKVQIVVVFWSRITVNKTSIYLIYEAIDEKVEHYHAPNMNVPRSIFPAVESMEDMRASPPESTFIRVMLMDVGFLQVQRRYRRRFRSKNGVYKDIRHCVNRRP 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01125 1020 SUPERFAMILY L domain-like 539 836 - -
Vimu9g01125 1020 Gene3D Ribonuclease Inhibitor 520 804 IPR032675 -
Vimu9g01125 1020 Gene3D - 132 186 IPR035897 -
Vimu9g01125 1020 Gene3D - 350 433 IPR042197 -
Vimu9g01125 1020 PRINTS Disease resistance protein signature 291 305 - -
Vimu9g01125 1020 PRINTS Disease resistance protein signature 214 229 - -
Vimu9g01125 1020 PRINTS Disease resistance protein signature 384 398 - -
Vimu9g01125 1020 PRINTS Disease resistance protein signature 622 638 - -
Vimu9g01125 1020 Pfam NB-ARC domain 194 421 IPR002182 GO:0043531
Vimu9g01125 1020 SUPERFAMILY "Winged helix" DNA-binding domain 419 526 IPR036390 -
Vimu9g01125 1020 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 78 798 IPR044974 GO:0006952
Vimu9g01125 1020 MobiDBLite consensus disorder prediction 802 822 - -
Vimu9g01125 1020 Gene3D - 187 343 IPR027417 -
Vimu9g01125 1020 SMART AAA_5 211 351 IPR003593 GO:0016887
Vimu9g01125 1020 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 444 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01125 Vimu-Chr9 18657688 18668924 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01125 191 706 WRKY Transcription Factor Family AT5G45050 34.296 1.80e-76 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01125 - - var:108322530 1716.82