Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01091 ATGGAGAAACCCTTGGAGGAGAGAGTGTTCTCCTATTTTTGTGTTCTTTTCAGTCTATACAATAAAGAATATTATTCTTCTACCTCTATTCAATTTTGGGTTCCTAACAAATTGGTCCGACCTGTCAGATCAAGAAGGTATGACAGCATGGAAGAGAGAGTCGGTGCCTTGGAAAGATTGACCAGCAAAAGGGGTGGAGCCATAGTCAAATTAAGAGGAAGTTTCCAAGAATTGAAAGAAATGATATTGGAATACCAGAATCAAGAAAGGTACTCAAAGGGAAGTGAGAAATCTATCATGAAAGGAAAGAAAGAAGGAAAAACCGGTATAGATGTTGAAAAAGATAGTCTGCAAAACATCAAGAAAGGTTGGAAATTCTCTGAAGGAAGAAGAAGGAAAAAAGATATCGAGAGTAGTAAACCAGATAAGGAGGGAGAAGAATTGTTGGGGCCTGGGGTTAAAACAGTGGGATCTTCAAGCAATGGCCACAAAGGAATTTCCAGTTTTGTTGCAGAATCTTTATTAACTAGCCATCTTGAATTACTCACAATGGAGGAATGTAAAGATGATGTTATCTGCCATAAGGATTCTCTCAATGCTGTCCAGAATGCTACACAAGCTGCTGATCGAGTACATCAAGATGAACAAAATTTGGACAAGGAGAGGAAAAAGTTTCGGGGTTGGAAGAAGAGAAAAGAATTCTTGATAATTTGTCTGAGAATTGTTAAAATCCAGGCCCATGTAAGTGGTCATCAAGTCAGAAAGCAGTATAAAACAATCATATGGTCCATAGGAATCCTGGAAAATAAGCAGTTCTTATCATTAATGGAACAAAAGGAGTCAACAATTCTCTCATATCGACCACCACCCAAGCCTCCAGACCTGAATTGGAAGGCAATAGCCAATGGATATCATGGGAACAAGCTTCAATGTTCCAACCTTGAGGACAAGGTTGTTCTGCAACAACATGTAATGTTAGGATATAATGTGTGTATGATAGAAGGAAACAGGTTGTTAGGTAAGGATCCACCCAAAACCAACAAAAAGTTCCTAGGTGGCAAAGGAACAAGATCTCAGGAACTGACACAAAGGAAAAGGAAAAATGACAAGTATAATGGGATGGAGACAACCTATGATGGGCAATGGGACCTGAGATTTTTGAAAAATATCATAGAAAGGTTCGCCAGGGAGAGCACAAGTTTGACTAGTTTCTAG 1215 0.3901 MEKPLEERVFSYFCVLFSLYNKEYYSSTSIQFWVPNKLVRPVRSRRYDSMEERVGALERLTSKRGGAIVKLRGSFQELKEMILEYQNQERYSKGSEKSIMKGKKEGKTGIDVEKDSLQNIKKGWKFSEGRRRKKDIESSKPDKEGEELLGPGVKTVGSSSNGHKGISSFVAESLLTSHLELLTMEECKDDVICHKDSLNAVQNATQAADRVHQDEQNLDKERKKFRGWKKRKEFLIICLRIVKIQAHVSGHQVRKQYKTIIWSIGILENKQFLSLMEQKESTILSYRPPPKPPDLNWKAIANGYHGNKLQCSNLEDKVVLQQHVMLGYNVCMIEGNRLLGKDPPKTNKKFLGGKGTRSQELTQRKRKNDKYNGMETTYDGQWDLRFLKNIIERFARESTSLTSF 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01091 404 ProSiteProfiles IQ motif profile. 241 261 IPR000048 GO:0005515
Vimu9g01091 404 MobiDBLite consensus disorder prediction 344 372 - -
Vimu9g01091 404 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 222 279 - -
Vimu9g01091 404 MobiDBLite consensus disorder prediction 128 149 - -
Vimu9g01091 404 MobiDBLite consensus disorder prediction 128 160 - -
Vimu9g01091 404 Coils Coil 68 88 - -
Vimu9g01091 404 Gene3D - 206 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01091 Vimu-Chr9 18224126 18226206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01091 160 268 CAMTA Transcription Factor Family AT5G09410 40.110 3.18e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01091 K21596 - gmx:100797717 131.339