Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01089 ATGGTGGACCGGTGCCCCAACTCGAATCTCTGCTCAATCCGTTTTCTTCAGCCATGTTCTTCCACAGGGTGTTGTCCCGTTTCTTTGCAACCCTTTGTCGAAGCTTCACCCTTTCTGTTTCACGAAATTCCTAACCTTTCTCCAATCACTTTCATTCTCTCCACCCATCACCCAACAAGTCCCTCTCATTTCATGGCGCACAAGCCTTTCAAATTCAATGAGGATATTCTCGAGCAACTGAGAAATGGGACTGCGAAATTCGAGCTTGTTTCTTCTCCTGTTCCTTCAGTTGCTGCTCCTCCAAACAACAACACAAGCTTGTTTGGAATTGGGAATTGTAGCGCTCTCTTTTTCGCTAGAATTGGCTCTTCCTCTATTGGGCACTCTCCCGCAATGAAGAAACTTGAGCATTTTTCAGTTCAGAAGGTTACAGGGGATGGGCGATGTCTGTTTCGTGCACTGGTCAAAGGAATGGCTTACAATAAGGGAACAGTTCTCAATCAACGCGAGGAGAGAGAAAATGCAGATGAATTAAGAATGGCTGTGAAAGAAGCTATATGTGAAAATGAGGGTGAACGTAATTTATATGAAGAAGCCCTCATTGCCATCACAGTTGATGAACCTCTAAATCGTTACTGCCAACGGATCGTACGACCTGATTTCTGGGGAGGAGAATCAGAGCTGTTGGTGCTGTCAAAGTTATGTAAACAGCCAATCGTTGTGTACATCCCAGAGCATGAGAGTTATGAGAGAAATTTGAGGGCAGATGCATGCCTTTTGCAACCCCAATTGGCAGACGTGATGAGGGAACTAGAAAAGCATAGAGGAGGTGGTTTTGGATCTGGCTTCATTCCCATTGCTGAGTATGGAAGTGAATTTAGAAAGGGTTCTAGGAGAAAAGCTGTGAGGCTATTGTACAGCGGCAAGAACCATTATGATCTTCTGGTATGA 951 0.4479 MVDRCPNSNLCSIRFLQPCSSTGCCPVSLQPFVEASPFLFHEIPNLSPITFILSTHHPTSPSHFMAHKPFKFNEDILEQLRNGTAKFELVSSPVPSVAAPPNNNTSLFGIGNCSALFFARIGSSSIGHSPAMKKLEHFSVQKVTGDGRCLFRALVKGMAYNKGTVLNQREERENADELRMAVKEAICENEGERNLYEEALIAITVDEPLNRYCQRIVRPDFWGGESELLVLSKLCKQPIVVYIPEHESYERNLRADACLLQPQLADVMRELEKHRGGGFGSGFIPIAEYGSEFRKGSRRKAVRLLYSGKNHYDLLV 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01089 316 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 106 316 - -
Vimu9g01089 316 Pfam OTU-like cysteine protease 144 245 IPR003323 -
Vimu9g01089 316 CDD OTU_plant_OTU3-like 136 316 - -
Vimu9g01089 316 Gene3D - 114 316 - -
Vimu9g01089 316 Coils Coil 168 188 - -
Vimu9g01089 316 FunFam Cysteine proteinases superfamily protein 117 256 - -
Vimu9g01089 316 SUPERFAMILY Cysteine proteinases 137 316 IPR038765 -
Vimu9g01089 316 ProSiteProfiles OTU domain profile. 138 316 IPR003323 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01089 135 242 C2H2 Transcription Factor Family AT1G50670 30.275 7.87e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01089 - - gmx:100807522 397.127