Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01068 CTTGGTTCGAAGGTAGAAGAGCTTCCTGGTTTTGAAGGGCCTCTTCCATTTGAACTGGAAACGGGGTATATAGGATTGGGAGAAAGAGATGATGATATGCAAGTGTTTTACTACTTTATCAAGTCAGAAAATGACCCTGCAAAAGATCCTCTTTTGCTTTGGCTAACTGGAGGTCCTGGTTGCTCTTCGTTTTCTGGTCTTGCTTTTCAAATAGGTCCGTTGGCATTCAAGACAGAGAAGTACGATGGGAACATGCCAAATTTGGTCTTGAGGCCACAGTCCTGGACGAAGGTGAGTAGCATTATTTTTGTAGATTTGCCTTTAGGAACTGGCTTCTCGTATGCAAAAAATCTCACTGCTAATAGAAGTGACTGGAAGTTAATTCACCATACCCATCAATTTCTTAGGAAGTGGCTGATTGATCACCCCGAATTTCTTTTAAATGACTTTTACATGGGAGGTGATTCATATTCTGGCATAGCTGGCCCTGCCATTGTTCAAGAAATTTCAAAGGGAAATGAAATTGGTCTTCAACCACCAATAAATCTCCAGGTTTTCTATCAGTTTCTCTATACCACTCTGAAGTCTAAATTGATCTTAAGATATTTTCAGGGATATCTGCTAGGGAACCCAATAACAACAAAAAAAGAAAAAAATGACCAAATCCCATTTGCTCATGGAATGGGACTTATTTCTGATGAACTCTATGAGTGCCTCTCAGGAATCAGTACATACAACATTTTGGATCGCTATTGTAAAGCTGATTCTACTAAGAAACATGAAGGTCCATGGACTAGATCTCTGACTCAAAATGGGGATCATGATGCAATTGTTCCTTTCATGTCGACTCAAGCATGGATCAGAGCTCTGAACTACTCCATTGTAGAAGATTGGAGGCCATGGCATCTAGAAAACCAAATTGCAGGATACACAAGAAGATACTCTAATCAAATGACATTTGCAACTGTGAAGGATTCAGGACACACAGCTCCTGAGTACAAGCCTGATGAAGGTTACGCCATGTTCACCAGGTGGATAGCTAATAAGCCTTTGTAA 1056 0.4044 LGSKVEELPGFEGPLPFELETGYIGLGERDDDMQVFYYFIKSENDPAKDPLLLWLTGGPGCSSFSGLAFQIGPLAFKTEKYDGNMPNLVLRPQSWTKVSSIIFVDLPLGTGFSYAKNLTANRSDWKLIHHTHQFLRKWLIDHPEFLLNDFYMGGDSYSGIAGPAIVQEISKGNEIGLQPPINLQVFYQFLYTTLKSKLILRYFQGYLLGNPITTKKEKNDQIPFAHGMGLISDELYECLSGISTYNILDRYCKADSTKKHEGPWTRSLTQNGDHDAIVPFMSTQAWIRALNYSIVEDWRPWHLENQIAGYTRRYSNQMTFATVKDSGHTAPEYKPDEGYAMFTRWIANKPL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01068 351 Gene3D - 263 347 - -
Vimu9g01068 351 Pfam Serine carboxypeptidase 265 348 IPR001563 GO:0004185|GO:0006508
Vimu9g01068 351 Pfam Serine carboxypeptidase 9 255 IPR001563 GO:0004185|GO:0006508
Vimu9g01068 351 SUPERFAMILY alpha/beta-Hydrolases 5 350 IPR029058 -
Vimu9g01068 351 Gene3D alpha/beta hydrolase 10 262 IPR029058 -
Vimu9g01068 351 PRINTS Carboxypeptidase C serine protease (S10) family signature 318 331 IPR001563 GO:0004185|GO:0006508
Vimu9g01068 351 PRINTS Carboxypeptidase C serine protease (S10) family signature 104 114 IPR001563 GO:0004185|GO:0006508
Vimu9g01068 351 PRINTS Carboxypeptidase C serine protease (S10) family signature 91 103 IPR001563 GO:0004185|GO:0006508
Vimu9g01068 351 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 163 IPR001563 GO:0004185|GO:0006508
Vimu9g01068 351 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 267 335 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01068 Vimu-Chr9 17891901 17899168 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01068 266 351 Calmodulin-binding Proteins AT2G22960 62.791 1.23e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01068 K16296 - gmx:100780069 431.795