Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01066 ATGAACACGATTTCTGTTATCTGTTTCAATTTTAACATTATTTTTCTGATTGTTCTTCCACTTTTCGTAAGCTTATCATCTCAGCTTGGTACGAAGGTAGAAGAGCTTCCTGGTTTTGAAGGGCCTCTTCCATTTGAACTGGAAACGGGGTATGTAGGATTGGGAGAAAGAGATGATGATATGCAAGTGTTTTACTACTTTATCAAGTCAGAGAATGACCCTGCAAAAGATCCTCTTTTGCTTTGGCTAACTGGAGGTCCTGGTTGCTCTTCGTTTTCTGGTCTTGCTTTTCAAATAGGTCCGTTTGCATTCAAGACAGAGAAGTACGATGGGAACGTTCCAAATTTGGTGTTGAGGCCACAGTCCTGGACGAAGGTGTCTAGCATTATTTTTGTAGATTTGCCTTTAGGAACTGGCTTCTCGTATGCAAAAAATCTCACTGCTAATAGAAGTGACTGGAAGTTAGTTCACCATACTCATCAATTTCTTAGGAAGTGGCTGATTGATCACCCTGAATTTCTTTCAAATGACTTTTACATGGGAGCTGATTCATATTCTGGCATACCTGGCCCTGCCATTGTTCAAGAAATTTCAAAGGGAAATGAAATTGGTCTTCAACCACCAATAAATATCCAGGGATATCTGCTAGGGAACCCATTAACAACAAGAAAAGAAAAAAATGACCAAATCCCATTTGCTCATGGAATGGGACTTATTTCTGATGAACTCTATGAGTGCCTTTCAGGAATCAATACATTCAACATTTTGGATCGCTATTGCAAAGCTGATTCTACTAAGAAACATGAAGGTCCATGGATTAGATCCCTGACTCAAAAGCTTGAGTCCTCTCTTAATTCTCGTCTCACAGAATTAGACACAAGATGCCAAATATATGGTTTTTTCCTTGCCACTCAATGGGCCAATGATGAGAGTGTTCGCAAATCTCTGCACATTCGAGAGGGAACAAAGGGTAAATGGGAACGTTGTTGGACTAGTGATTTTGAGCGAGAGATCTCTAGTAGCTTCGCCTTTCATGTAAATCTCAGTGCGAAAGGATATCGTTCTTTAATATATAGTGGGGATCATGATGCAGTTGTTCCTTTCATGTCGACTCAAGCATGGATCAGAGCTCTGAACTACTCCATTGTAGAAGATTGGAGGCCGTGGTTTCTAGAAAACCAAGTTGCAGGGTGA 1194 0.4045 MNTISVICFNFNIIFLIVLPLFVSLSSQLGTKVEELPGFEGPLPFELETGYVGLGERDDDMQVFYYFIKSENDPAKDPLLLWLTGGPGCSSFSGLAFQIGPFAFKTEKYDGNVPNLVLRPQSWTKVSSIIFVDLPLGTGFSYAKNLTANRSDWKLVHHTHQFLRKWLIDHPEFLSNDFYMGADSYSGIPGPAIVQEISKGNEIGLQPPINIQGYLLGNPLTTRKEKNDQIPFAHGMGLISDELYECLSGINTFNILDRYCKADSTKKHEGPWIRSLTQKLESSLNSRLTELDTRCQIYGFFLATQWANDESVRKSLHIREGTKGKWERCWTSDFEREISSSFAFHVNLSAKGYRSLIYSGDHDAVVPFMSTQAWIRALNYSIVEDWRPWFLENQVAG 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01066 397 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Vimu9g01066 397 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Vimu9g01066 397 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Vimu9g01066 397 SUPERFAMILY alpha/beta-Hydrolases 33 397 IPR029058 -
Vimu9g01066 397 Gene3D alpha/beta hydrolase 32 397 IPR029058 -
Vimu9g01066 397 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 392 IPR001563 GO:0004185|GO:0006508
Vimu9g01066 397 FunFam Serine carboxypeptidase-like 19 26 271 - -
Vimu9g01066 397 Pfam Serine carboxypeptidase 37 397 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01066 Vimu-Chr9 17866830 17874041 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01066 27 56 Calmodulin-binding Proteins AT2G22960 63.333 1.37e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01066 K16296 - gmx:100780069 684.1