Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu9g01054 | ATGACACATTCTCTGTTTCTCTTTCATTTTCTTCTTCTCATATTTCACGTTTTCTTCAGTTTCATTCCAGCGCTTTCACTCTCCTCCGACGGCCTCGCGCTTCTCGCTCTCAAGTCCGCCGTCGACCAGCCTTCCTCCGCTTTCTCCGACTGGAACGACGGCGACGTCACGCCCTGCGCCTGGTCGGGAATCGTTTGCGCCAACATCTCCGGCGAGGAGGACCCCCGCGTCGTCGGAATCGCCCTCGCCGGGAAATCCATCTCCGGTTACCTCCCGTCAGAGCTTGGCTCTCTGCGCTTCCTCCGCCGACTTAACCTCCACGACAACGCCTTCTCCGGCGTCCTCCCGGCGCAGCTCTCCAACGCTACCGCACTCCACAGCCTCTTCCTCCACCGTAACAACCTCTCCGGCCCCATCCCCCGCTCTCTCTGTAGCCTCCCGCGCCTCCAAAATCTCGACCTCTCCGAAAATGCATTCTCCGGTCATATTCCCGACCACCTCGGAAACTGCAAGAACCTCCAGCGCCTTATCGTCGCCGGCAACAGATTTTCGGGTGAGATTCCCGCCGGCGTGTGGCCGGAACTTCAGAACCTCCTCCAACTCGACCTCTCCGCGAATGAGTTAACCGGTTCAATCCCTGACGAAATTGGAACCCTAGTTTCCCTCTCTGGCACGCTGAACCTCTCCTTCAACCACCTCTCCGGTAAGATTCCGGCGTCGTTGGGAAAATTACCGGCGACGGTGAGCTTCGACTTCAGAAACAACAACCTCAGCGGAGAAATTCCACAAACGGGGTCGTTTTCAAACCAAGGTCCCACGGCGTTCCTTGGAAATCCTAACCTATGCGGGTTTCCTCTTAGAAAATCATGTTCCGGTTCGGACCGGGATTTTTCTCCCGGTTCGGATCAAAACAAACCGGTCCACCCGTCAAAGGGGTTAAGCCCCGGTTTAATTATTTTAATCTCCGCGGCTGATGCTGCTGTTGTGGCCTTCATTGGGCTTGTGATTGTTTATGTCTATTGGAAGAAAAAGGATGATGAGAATGCGTGTAGTTGCATTAGGAGAAGAAAGTTTGGCGAAGAGAAAGGGAATGTGTGTTTCTGTGGTGGATTCCCATGTGTTAGTGGGGAGAAAAGTGATGATGACGATGGTGATGAAGATTATGAGGTGGAGGGGGCTGAGGGGGAGGGTGAAGGAGAATTGGTGAGGATTGATAAGGGATTGAGTTTCGAACTTGATGAGTTGTTGAGGGCTTCTGCTTACGTGTTGGGGAAGAGTGGGTTGGGAATTGTGTATAAGGTGGTGTTGGGGAATGGGGTTCCTGTGGCTGTGAGGAGGCTGGGGGAGGGAGGGGAACAGAGGTACAAGGACTTTGCTGCAGAGGTTATGGCCATTGGGAAGGTCAAGCACCCTAATGTTGTAAGGTTGAGGGCTTACTATTGGGCACATGATGAGAAGCTTCTCATCAGTGATTTCATCTCCAATGGCAATCTCACACATGCCCTTAGAGGGAGAAATGGCCAACCATCTACAAATCTTTCATGGTCCACCAGGCTGAAAATCGCAAAAGGAACAGCCAGGGGCTTGGCCTATCTCCACGAATGCAGCCCAAGAAAGTTCGTCCATGGTGACATTAAACCCTCCAACATCCTACTTGACAATGACTTCCAACCCTACATTTCTGATTTCGGCCTGAACCGTCTGATCAGCATTACCGGCAATAACCCCTCCACCGGCGGATTCATGGGTGGAGCTCTTCCTTACATGAAGTCTTCACAGAAAGAGAGAACCGACAATTACAAAGCCCCCGAGGCTCGTGTCCCTGGGTGCAGACCCACCCAGAAATGGGATGTGTACTCATTTGGGGTTGTGTTGCTTGAAATACTAACTGGGAGGTCACCAGAATCATCTCCCACCACATCAACTTCCATGGAAGTCCCTGACTTGGTAAGGTGGGTGAGGAAAGGGTTCGATCAAGAAAGCCCGTTATCTGAGATGGTTGATCCATCGCTGCTCCAAGAAGTGCGTGTTAAGAAAGAGGTGCTGGCTGTGTTTCACGTAGCTTTGGCTTGCACTGAAGGAGACCCTGAGGCTCGGCCAAGGATGAAAACTGTCTCTGAAAATCTTGACAAAATTGGAACTTAA | 2145 | 0.5212 | MTHSLFLFHFLLLIFHVFFSFIPALSLSSDGLALLALKSAVDQPSSAFSDWNDGDVTPCAWSGIVCANISGEEDPRVVGIALAGKSISGYLPSELGSLRFLRRLNLHDNAFSGVLPAQLSNATALHSLFLHRNNLSGPIPRSLCSLPRLQNLDLSENAFSGHIPDHLGNCKNLQRLIVAGNRFSGEIPAGVWPELQNLLQLDLSANELTGSIPDEIGTLVSLSGTLNLSFNHLSGKIPASLGKLPATVSFDFRNNNLSGEIPQTGSFSNQGPTAFLGNPNLCGFPLRKSCSGSDRDFSPGSDQNKPVHPSKGLSPGLIILISAADAAVVAFIGLVIVYVYWKKKDDENACSCIRRRKFGEEKGNVCFCGGFPCVSGEKSDDDDGDEDYEVEGAEGEGEGELVRIDKGLSFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKDFAAEVMAIGKVKHPNVVRLRAYYWAHDEKLLISDFISNGNLTHALRGRNGQPSTNLSWSTRLKIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLNRLISITGNNPSTGGFMGGALPYMKSSQKERTDNYKAPEARVPGCRPTQKWDVYSFGVVLLEILTGRSPESSPTTSTSMEVPDLVRWVRKGFDQESPLSEMVDPSLLQEVRVKKEVLAVFHVALACTEGDPEARPRMKTVSENLDKIGT | 714 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu9g01054 | 714 | Pfam | Leucine rich repeat N-terminal domain | 28 | 66 | IPR013210 | - | |
Vimu9g01054 | 714 | Gene3D | Ribonuclease Inhibitor | 192 | 292 | IPR032675 | - | |
Vimu9g01054 | 714 | SUPERFAMILY | Protein kinase-like (PK-like) | 422 | 708 | IPR011009 | - | |
Vimu9g01054 | 714 | SUPERFAMILY | L domain-like | 28 | 287 | - | - | |
Vimu9g01054 | 714 | FunFam | Os07g0541700 protein | 495 | 583 | - | - | |
Vimu9g01054 | 714 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 27 | 192 | - | - | |
Vimu9g01054 | 714 | CDD | STKc_IRAK | 423 | 712 | - | - | |
Vimu9g01054 | 714 | ProSiteProfiles | Protein kinase domain profile. | 417 | 712 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu9g01054 | 714 | FunFam | Leucine-rich repeat receptor-like protein kinase | 197 | 292 | - | - | |
Vimu9g01054 | 714 | Gene3D | Phosphorylase Kinase; domain 1 | 409 | 492 | - | - | |
Vimu9g01054 | 714 | FunFam | Leucine-rich repeat receptor-like protein kinase | 400 | 492 | - | - | |
Vimu9g01054 | 714 | Pfam | Protein kinase domain | 422 | 648 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu9g01054 | 714 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 166 | 712 | IPR046959 | - | |
Vimu9g01054 | 714 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 540 | 552 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu9g01054 | 714 | Pfam | Leucine rich repeat | 101 | 158 | IPR001611 | GO:0005515 | |
Vimu9g01054 | 714 | Gene3D | Ribonuclease Inhibitor | 27 | 191 | IPR032675 | - | |
Vimu9g01054 | 714 | Gene3D | Transferase(Phosphotransferase) domain 1 | 493 | 714 | - | - | |
Vimu9g01054 | 714 | SMART | serkin_6 | 421 | 712 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu9g01054 | 714 | SMART | LRR_typ_2 | 146 | 170 | IPR003591 | - | |
Vimu9g01054 | 714 | SMART | LRR_typ_2 | 98 | 121 | IPR003591 | - | |
Vimu9g01054 | 714 | SMART | LRR_typ_2 | 195 | 219 | IPR003591 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu9g01054 | Vimu-Chr9 | 17498952 | 17502637 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu9g01054 | 23 | 712 | Receptor kinase-like Gene Family | AT1G67510 | 68.169 | 0.0 | 941 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Vimu9g01054 | Pkinase | 7.4e-32 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu9g01054 | - | - | var:108346287 | 1337.01 |