Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01008 ATGGCCAACCAAACATTCACAAGCTTGCTCACCAATGACAAGCAATTTGCCTCTCTTCAATTGCCTCCTAGGGCACCAACTAGCAATAAAAACAAGTCCATTGTGAATGAAGGTCGCGACATCTTATTTCAAGCAAGAAATGTGTTGAAAACACATGAGAATCCTTCTCTTATGTATCTTGGAGCAGAACATGTTCATGGTACTCCAAATGATGATGTCGAGGATTTGGACCGTGACTCGGACTCGAAATTGGAGGCTCAAATGAAAAGAAAGCAGGCTAACAGGGTGTATTCTGCGAGATATCGACTCCGCAAGCAAGCCAGAGCACAAAATTTGAAAAACCAAGCTGAGGCACTTGAAGCTGAAGTTTCAATGTTTCAATCTCAACTGTTATACTGGAAAAGTCTCCATGACGGACTAATCGAAGAGAATACTGTGATGAGAGCCCAATGTGAAACTGCTAGTAAGCTCATTGCTGAAAAGGAAGGTAAATAG 495 0.4202 MANQTFTSLLTNDKQFASLQLPPRAPTSNKNKSIVNEGRDILFQARNVLKTHENPSLMYLGAEHVHGTPNDDVEDLDRDSDSKLEAQMKRKQANRVYSARYRLRKQARAQNLKNQAEALEAEVSMFQSQLLYWKSLHDGLIEENTVMRAQCETASKLIAEKEGK 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01008 164 SUPERFAMILY Leucine zipper domain 87 143 IPR046347 GO:0003700|GO:0006355
Vimu9g01008 164 CDD bZIP 89 130 - -
Vimu9g01008 164 Coils Coil 102 129 - -
Vimu9g01008 164 SMART brlzneu 82 146 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01008 80 157 bZIP Transcription Factor Family AT1G32150 34.615 3.25e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01008 K09060 - ccaj:109815839 112.849