Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01003 ATGTACAATTTTGGTTTTGATAAGAGTCTGTACAATGTTTTGGAGGTCAACAAAACAAATTATGAGAATTGTATTGATACAAATTTCATACAAAATATCACAAAAGGGGGCAGAGATGTTGTTCAACTTTTAGAAGCAAGAACATATTATTTTCTTTGTGGAAGAGGCTTTTGCTTTGAGGGAATGAAAATAGCCATAAATGTTGAAGAACCCACCTACAACCTATCACCCTCAGCACTATCCAATAAAGCCTTTCACTCAAGTAGCATCATAAATACTGAACTCATTTTGTTTTTGGTCACTGTTTTACTAATGGAGGTTTATATTATATAA 333 0.3243 MYNFGFDKSLYNVLEVNKTNYENCIDTNFIQNITKGGRDVVQLLEARTYYFLCGRGFCFEGMKIAINVEEPTYNLSPSALSNKAFHSSSIINTELILFLVTVLLMEVYII 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01003 110 SUPERFAMILY Cupredoxins 4 68 IPR008972 -
Vimu9g01003 110 Gene3D - 1 73 IPR008972 -
Vimu9g01003 110 PANTHER BLUE COPPER PROTEIN 4 77 IPR039391 GO:0009055
Vimu9g01003 110 Pfam Plastocyanin-like domain 3 61 IPR003245 GO:0009055
Vimu9g01003 110 ProSiteProfiles Phytocyanin domain profile. 1 70 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01003 Vimu-Chr9 16865079 16865582 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01003 4 96 Phytocyanin Superfamily AT2G27035 48.936 6.47e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01003 - - vra:106770501 192.2