Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00987 ATGGCCCCAACGCTTCCACATAATAGTTGGGATTGCCAGAGGGCTTTTGTATCTACACCAAGATTCCCAGTTGAGGATTATTCACAGAGATCTCAAAGCAATGGATACATGGCTCCAGAATATGCTGTTGATGGACTATATTCCATCAAATCGGACGTTTTCAGCTTTGGTATTTTGTTGTTGGAGATTGTATGTGGCACCAAAAATAGAGCTCTCTGCCACGGAAACCAAACTCTGAACCTTGTTGGCTATGTAAGCACTCAACAAACTTATTATTTCTCTATGGCATGGACACTTTGGAAAGAGCAAAATGCTTTACAGCTTATTGACTCAAGTATAAAAGACTCATGTGTGGTCTCAGAAGTACTACGATGCATCCATGTTAGTCTGTTGTGCGTGCAACAATACCCGGATGATAGGCCAACCATGACATCGGTTATTCAAATGTTAGGGAGTGAAATGGAACTGGTTAACCCAAAAGAGCCTGGTTTCTTTCCCACAAGGATTTCGGACCAAGGAAGTCAGCTGAACATATTGCTTGAATTTGCTTTGGAAGTACTTGCGTTGCATTCCCAAAGGATTCTTGTTTCAAAACCTGTTTAG 603 0.4163 MAPTLPHNSWDCQRAFVSTPRFPVEDYSQRSQSNGYMAPEYAVDGLYSIKSDVFSFGILLLEIVCGTKNRALCHGNQTLNLVGYVSTQQTYYFSMAWTLWKEQNALQLIDSSIKDSCVVSEVLRCIHVSLLCVQQYPDDRPTMTSVIQMLGSEMELVNPKEPGFFPTRISDQGSQLNILLEFALEVLALHSQRILVSKPV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00987 200 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 34 171 - -
Vimu9g00987 200 Gene3D Transferase(Phosphotransferase) domain 1 13 161 - -
Vimu9g00987 200 Pfam Protein tyrosine and serine/threonine kinase 34 150 IPR001245 GO:0004672|GO:0006468
Vimu9g00987 200 SUPERFAMILY Protein kinase-like (PK-like) 28 173 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00987 Vimu-Chr9 16576822 16577886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00987 35 165 Receptor kinase-like Gene Family AT4G23150 46.970 1.84e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vimu9g00987 PK_Tyr_Ser-Thr 2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00987 - - gmx:100807748 236.884