Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00980 ATGGGGTTCTTCACCGACGCCTACGACCTTTTCTGTATTTCCACAGTTTCCAAACTTCTGGGACGATTGTACTACTTCGATCCTAGCTCCGAAAAGCCGGGAAAGCTCCCATTATCAGTAAACAACTTCGTCATTGGTGTCGCCCTTGTCGGAACCCTCTCCGGCCAGCTAGTCTTTGGCTGGCTCGGCGATAAACTCGGCCGGAAAAAGGTCTACGGAATCACCCTCATCCTCATGGTTCTCTGCGCCATTGCCTCCGGTCTCTCATTCGGCGCCAGCGCGAAATCCGTAATGGGAACACTGTGTTTCTTCCGCTTCTGGCTTGGCTTTGGCATCGGCGGCGACTATCCCTTATCCGCCACTATCATGTCGGAGTACGCCAATAAGAGGACACGCGGGGCGTTTATAGCTGCAGTGTTCGCCATGCAGGGCGTGGGAATCATCTTCGCGGGGCTTGTCTCCATGACACTCTCCGCGCTTTTCCAATCCTATTACCATGGACCGGAGGCTGATCTTCTATGGCGGTTGGTTCTCATGATCGGTGCCATTCCGGCGCTGTTGACTTACTACTGGCGAATGAAGATGCCAGAAACGGGGCGTTACACTGCCATCATAGAAGGTAACGCAAAACAAGCTGCGGCGGATATGGCGAGAGTATTGGACATTGAAATCCAAGCAGAGCAGGATAAGATTGCGGAGTTCAACGCAGCGAATAACTACCCTTTGTGGTCGAACGAGTTCTTTAACCGTCATGGGCGTCATTTGATTGGAACCATGAGCTCATGGTTTCTTCTTGACATCGCTTTTTACAGCCAGAATCTAACCCAGAAGGATATTTTCCCTGCCATCGGACTCATAGACAAAGATTTTAACATGAGCGCCATCGGTGAAGTGTTCCAGACGTCACGTGCCATGTTCGTGATCGCTCTGCTGGGGACCTTCCCCGGTTACTGGTTCACCGTCTTCTTCATCGAGAAGCTGGGGCGTTACAAGATCCAACTCGTTGGCTTCTTCATGATGTCATTCTTCATGTTTGTGATCGGTGTGAAGTACGATTACCTCAAGAACGAGAACAAGGGCCTCTTCGCTCTTCTCTACGGCTTGACGTTCTTCTTCGCAAACTTCGGACCAAACAGCACGACCTTCGTGCTTCCCGCGGAGCTGTTTCCAACGCGGGTGAGGAGCACGTGCCATGCGCTGAGTGCAGCGGCGGGGAAGGCTGGGGCACTGGTGGGGACGTTCGGAATACAGAGCTTGACGGTGGGTGGTGACACGTATAAGATTAAGAAGGCGATGATTTTGCTGGCGGTGACTAACCTGTTAGGGTTCTTCTGCTCGTTCTTGGTTACTGAAACTAAGGGTAGATCGTTGGAGGAGATTTCCGGTGAGGATGGAAGAGAAAGTGAACTGACGGCAACGCCGAACGATTATAGGGTTCCGGTGTCAAGGACAGAGACCATGTGA 1464 0.5198 MGFFTDAYDLFCISTVSKLLGRLYYFDPSSEKPGKLPLSVNNFVIGVALVGTLSGQLVFGWLGDKLGRKKVYGITLILMVLCAIASGLSFGASAKSVMGTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGVGIIFAGLVSMTLSALFQSYYHGPEADLLWRLVLMIGAIPALLTYYWRMKMPETGRYTAIIEGNAKQAAADMARVLDIEIQAEQDKIAEFNAANNYPLWSNEFFNRHGRHLIGTMSSWFLLDIAFYSQNLTQKDIFPAIGLIDKDFNMSAIGEVFQTSRAMFVIALLGTFPGYWFTVFFIEKLGRYKIQLVGFFMMSFFMFVIGVKYDYLKNENKGLFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAAAGKAGALVGTFGIQSLTVGGDTYKIKKAMILLAVTNLLGFFCSFLVTETKGRSLEEISGEDGRESELTATPNDYRVPVSRTETM 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00980 487 MobiDBLite consensus disorder prediction 458 487 - -
Vimu9g00980 487 FunFam Inorganic phosphate transporter 1-6 1 474 - -
Vimu9g00980 487 SUPERFAMILY MFS general substrate transporter 1 461 IPR036259 -
Vimu9g00980 487 CDD MFS_PhT 1 453 - -
Vimu9g00980 487 Pfam Sugar (and other) transporter 4 461 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vimu9g00980 487 Gene3D MFS general substrate transporter like domains 1 476 IPR036259 -
Vimu9g00980 487 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 458 - -
Vimu9g00980 487 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 454 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00980 Vimu-Chr9 16534252 16535751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00980 1 463 Inorganic Solute Cotransporters AT5G43350 60.941 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00980 K08176 - gmx:100805284 866.685