Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00962 ATGTCCCGTTTTATTGGAGCCTGTAAGGATCCTCTGATGGTTATTGTTACAGAGATGTTACCTGGTTTGTCACTGCGAAGATATCTGATCACTATACGCCCTAAACAATTAGAGCTTTATGTGGCTATAAAGTTTGCCCTTGATATTGCTCTGGCCATGGATTGGTTACATGCCAATGGAATCATACATAGAGATCTGAAGCCTGGTCACCTTTTGTACAGTACAGTGACATTGCGTCAAGGGGAGAAAAAGCATTACAACAATAAGGTTGATGTCTACAGCTTTGGAATTGTTTTGTGGGAGCTACTAACAAATCGCATGCCTTTTGAAGGAATGTCGAATTTACAGGCTGCTTATGCTGCTGCATTTAAGCAAGAGAGGCCTAACCTTCCTGAAGACATATCTCCTGATCTTGCCTTCATCATTCAATCATGCTGGGTTGAAGATCCTAACATCAGACCAAGCTTTAGCCAGATTATCCGCATGCTTAATAAGTTCATCCTCACTCTCCAACCACCACCATTTTCAGCACCACCTGAACCGGACGATGAACCTGAGGCCGTGACAAGTAATGGCACCATAACTGACTTTTCTACGCGAAATAAAGTAAAGTTTTCATTTATTCGCCACCTTTTTTCTTCAAAGAGGACCAAAAGCTGA 660 0.4212 MSRFIGACKDPLMVIVTEMLPGLSLRRYLITIRPKQLELYVAIKFALDIALAMDWLHANGIIHRDLKPGHLLYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPNLPEDISPDLAFIIQSCWVEDPNIRPSFSQIIRMLNKFILTLQPPPFSAPPEPDDEPEAVTSNGTITDFSTRNKVKFSFIRHLFSSKRTKS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00962 219 ProSiteProfiles Protein kinase domain profile. 1 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu9g00962 219 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 84 164 - -
Vimu9g00962 219 Pfam Protein tyrosine and serine/threonine kinase 3 67 IPR001245 GO:0004672|GO:0006468
Vimu9g00962 219 Pfam Protein tyrosine and serine/threonine kinase 83 163 IPR001245 GO:0004672|GO:0006468
Vimu9g00962 219 SUPERFAMILY Protein kinase-like (PK-like) 3 181 IPR011009 -
Vimu9g00962 219 Gene3D Transferase(Phosphotransferase) domain 1 1 78 - -
Vimu9g00962 219 Gene3D Transferase(Phosphotransferase) domain 1 79 172 - -
Vimu9g00962 219 MobiDBLite consensus disorder prediction 174 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00962 Vimu-Chr9 16139892 16145912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00962 3 216 MAP Kinase Kinase Kinase AT5G01850 63.636 4.85e-101 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vimu9g00962 PK_Tyr_Ser-Thr 2.1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00962 - - gmx:100816708 366.696