Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00953 ATGTCCACCAAGGACTGCGGCCACCACCACTCTTCGCGCCGCCGTCTCATCCGCCTCGTCCTCGTCGGCGTTGCTGCCTTCATCCTCCTAGTCCTCTTCCTTGTCTTCCTCATATGGGTCATCCTCCGCCCGGCGAACCCCGCTTCACCCTCCAAGACGCCACCCTCTTCACCTTCAACCTCTCTTCCCCTATCCCCAACACCCTCTCTCTCACCATGCAGTGACTTGGTTCAACAAGTAGTTGCAGAATGCAGTCAACATCTCCTTGAACTGCAGTCCCTGATAAGGAAGATGGAGGAAGAACGTTTGGAAATCCAAACAGTAAGAAATGCAGATTATTACGGAGCTCTTATCCATCATCTTACTTTAGTCCGAAATAAACGTTGCCTAATGGCTTATGTGTATAATCGAGCAGAAATTATACGGAACTTATTATGGAAGATAGGGCATGTGCTTCCTCAAGAAATTGAAGAGAAGCTTTCTCATGGGGAGGGAGAATATTATAAGAAGCATTCTGCAGCATTGAAATATTATATGTCGAAAGTGATGGTTGATCTGACTGTGGTAACCTCTCCCTCTCCCTCTCCCCCGCTTTAA 597 0.4807 MSTKDCGHHHSSRRRLIRLVLVGVAAFILLVLFLVFLIWVILRPANPASPSKTPPSSPSTSLPLSPTPSLSPCSDLVQQVVAECSQHLLELQSLIRKMEEERLEIQTVRNADYYGALIHHLTLVRNKRCLMAYVYNRAEIIRNLLWKIGHVLPQEIEEKLSHGEGEYYKKHSAALKYYMSKVMVDLTVVTSPSPSPPL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00953 198 Gene3D - 56 182 - -
Vimu9g00953 198 SUPERFAMILY GINS helical bundle-like 74 192 IPR036224 -
Vimu9g00953 198 Coils Coil 81 111 - -
Vimu9g00953 198 CDD GINS_A_psf1 74 182 IPR005339 GO:0000811|GO:0006260
Vimu9g00953 198 PANTHER PARTNER OF SLD5 74 195 IPR005339 GO:0000811|GO:0006260
Vimu9g00953 198 MobiDBLite consensus disorder prediction 48 62 - -
Vimu9g00953 198 MobiDBLite consensus disorder prediction 48 67 - -
Vimu9g00953 198 Pfam GINS complex protein 92 164 IPR021151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00953 Vimu-Chr9 15870158 15871904 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00953 74 196 Core DNA Replication Machinery Family AT1G80190 57.143 9.21e-46 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00953 K10732 - qsu:112021696 182.956