Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00942 ATGGATTCCGATCCCAAATCTTCCACATCACCAGCGTCAAACTCTAACTCTAGCAAGCTACCACCCTCGAAGGAACAACACCATCGAGGCCTATTGAACCACTGTGAAATAATGTGTGCTGCAACTAGTAGTTCTCGTGTGCTCGTTCAAGAAGGGATTTATGATGAATTTGAAAAGAAATTGGTAGAGAAAGCAAAAGCCTGGGTGGTTGGTGATCCTTTTGATCCTAAATTTCAACAAGGGCCTCAGGTTGACGTGAAGCAATTTGAAAAGATCTTTTCCTATATTAAGATTGGCCTTGAGGAAGTTTAA 312 0.4167 MDSDPKSSTSPASNSNSSKLPPSKEQHHRGLLNHCEIMCAATSSSRVLVQEGIYDEFEKKLVEKAKAWVVGDPFDPKFQQGPQVDVKQFEKIFSYIKIGLEEV 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00942 103 MobiDBLite consensus disorder prediction 1 21 - -
Vimu9g00942 103 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 37 102 - -
Vimu9g00942 103 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 24 103 IPR016163 GO:0016620
Vimu9g00942 103 Pfam Aldehyde dehydrogenase family 42 102 IPR015590 GO:0016491
Vimu9g00942 103 MobiDBLite consensus disorder prediction 1 28 - -
Vimu9g00942 103 SUPERFAMILY ALDH-like 41 101 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00942 Vimu-Chr9 15668996 15669603 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00942 38 102 Aldehyde Dehydrogenase Gene Family AT3G24503 66.154 2.74e-22 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00942 K12355 - gmx:100817721 106.301