LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu9g00938	ATGTGGTGCCTTCTGAATGATAATGTCAGTGTCGTCGGCGACGAAGTTGAGAGATTTTTCGTGGGGCATGGGACGATGTACTTCCCGTATCTACGCATCAGATGTAGCTTCTACGATGCCGGGGCAAAGGGCTCGTCCCATGAATCGGTGTTTCGTGAACGCGGCGGGGTAGTTGGGGTGCGGCGCGAAGCGCCCACGCACGTAAAGGGTGATGGAGATATATGTTTGTTGATTTTAGAACAGGAAGATTTTGGAGTCAGATATGGTGACTCCACAGGAAAGGAAGAAGGGTTGAGGAAGTGGAAGAGCATCTTGTTGAATCTGATACCACAAATAAACTCTTTTGTTATTGTGATCAGTGTTAGAATGAGCGGTGGTTGCCGGCCTTTGCCCGATCAGGACCGAATTAAGATTAAGAATGCTTTGAGAGCAATCAAGGTCCAAGTTAATCATGGACAGAATATTAGACGTTACAAAGTCACTGTAGTCACAAAAGAACCTCTCAGAGCCTTAATGGAAAGTGTTGTTATTTCTACAGAAAACCCTTGCATTATTTTAGAAGGAGAAGGTGTAGGTTTATTGGTTATCAAGACACTTTATGCGATCTTTTGGGATGTCATGTCTTTCAAGATTGTTACATTCAGGGTGAAGCCGACTTTACATATGGTTGAGCAAAAATTCAGCAGATGA	690	0.4406	MWCLLNDNVSVVGDEVERFFVGHGTMYFPYLRIRCSFYDAGAKGSSHESVFRERGGVVGVRREAPTHVKGDGDICLLILEQEDFGVRYGDSTGKEEGLRKWKSILLNLIPQINSFVIVISVRMSGGCRPLPDQDRIKIKNALRAIKVQVNHGQNIRRYKVTVVTKEPLRALMESVVISTENPCIILEGEGVGLLVIKTLYAIFWDVMSFKIVTFRVKPTLHMVEQKFSR	229

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu9g00938	229	Gene3D	paz domain	112	183	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu9g00938	Vimu-Chr9	15596253	15598832	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu9g00938	128	172	Eukaryotic Initiation Factors Gene Family	AT5G43810	52.174	4.22e-08	51.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu9g00938	K11593		-	gmx:100799033	77.4109