Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00936 ATGAACCGTGTCGGGGTAGTTAAGGTGCGGCGGCTAAGGAAAGGAAGAAGGGCTGAGGAAGTGGAGGAGCATCTTGCTGAATCTGATACCACAAATAAGCTCTTTTGTTATTGTGATCAGTGCCTGAATGAGTTGTGGTTGTCGGCGGATTATGGAAAGTGTCCACTTACTGGTGAATCACTTACTATGGATGACATTGTACCAATCAAGACAGGGAAGATGGGACTGTCTTCTAATATTGGTTGGTTTAACTTGTCAATGTTGGTCAAGTTTTGTGTCTTGAATAAAGCAGTCTTGACAACTGATCATTTTTGTGCTGCAGAAGTCTCAGCTAGGGCATTTTGTGAGGCCATTCCTATTAAGAATGCTTTGAGAGCAATCAAGGTCCAAGTTAATCATGGACAGAATATTAGACGTTACAAAGTCACTGTAGTCACAAAAGAACCGCTCAGAGCCTTAATGGAAAGTGTTGTTATTCCCACAGAAAATCCTTCCATTATTTTAGAAGGAGAAGGTAGACGAACAATCATTTGTCACTGGGACCATCAGTCCATAAACAATAATGCTACATTCACTCCCACCAAATTTGATAGCAAGTGGCATTACTTTCAAGATGATCCTAGTGGTTTTGTATTCAAAGGAGGTGCCATTAGTGGAAATGGTAAAGTGAATTTAGGAAGAACATGGCAACAATATTCAAGAGTCATATTTCATATTACATATTTTTCTGACATTGTAACTCGTCAAGGATGGGTTGCTTGGAGAGTAGCTGGCAATGAGAACTCAACTACTTATGCTGAAGTTGATTGTAAGGGACCAGGAGCGGACACTTCGAAACATGTTCCATGGATGAAGAAACTAAGTTCTTCGGACTTATCCACAGTATCGTAA 891 0.4052 MNRVGVVKVRRLRKGRRAEEVEEHLAESDTTNKLFCYCDQCLNELWLSADYGKCPLTGESLTMDDIVPIKTGKMGLSSNIGWFNLSMLVKFCVLNKAVLTTDHFCAAEVSARAFCEAIPIKNALRAIKVQVNHGQNIRRYKVTVVTKEPLRALMESVVIPTENPSIILEGEGRRTIICHWDHQSINNNATFTPTKFDSKWHYFQDDPSGFVFKGGAISGNGKVNLGRTWQQYSRVIFHITYFSDIVTRQGWVAWRVAGNENSTTYAEVDCKGPGADTSKHVPWMKKLSSSDLSTVS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00936 296 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 204 291 - -
Vimu9g00936 296 SUPERFAMILY Pectin lyase-like 155 285 IPR011050 -
Vimu9g00936 296 Pfam Pectinesterase 222 285 IPR000070 GO:0030599|GO:0042545
Vimu9g00936 296 Gene3D - 199 296 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00936 Vimu-Chr9 15583083 15589399 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00936 204 293 Carbohydrate Esterase AT1G05310 38.889 1.92e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00936 - - pvu:PHAVU_008G271600g 142.124